Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J12
(358 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 188 1e-48
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 185 1e-47
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 171 2e-43
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 86 9e-18
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 84 4e-17
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 81 3e-16
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 80 6e-16
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 78 2e-15
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 77 5e-15
03_01_0034 + 318432-318825,318902-319851 76 7e-15
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 75 1e-14
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 75 1e-14
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 74 4e-14
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.27
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.61
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.1
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 1.4
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 1.4
12_02_0823 + 23461423-23462124 28 1.9
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 2.5
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 3.3
03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661... 27 3.3
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 4.3
12_02_0070 - 13164738-13164809,13165187-13165501 27 5.7
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 5.7
07_01_0776 + 5983684-5983857,5983962-5984072,5984151-5984302,598... 27 5.7
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 26 7.6
08_02_1012 + 23550314-23551504 26 7.6
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 26 7.6
07_01_0284 - 2082249-2082256,2082496-2083009 26 7.6
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 26 7.6
04_04_0482 - 25547393-25547455,25547767-25547866,25548154-255482... 26 7.6
03_05_1078 + 30205876-30206346,30206624-30207001,30207967-302080... 26 7.6
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646... 26 7.6
02_02_0489 + 10869482-10871218 26 7.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 188 bits (458), Expect = 1e-48
Identities = 78/88 (88%), Positives = 86/88 (97%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMFH 357
HVPRAVFVDLEPTV+DEVRTG YRQ+FH
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFH 88
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 185 bits (450), Expect = 1e-47
Identities = 76/88 (86%), Positives = 86/88 (97%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMFH 357
HVPRAVFVDLEPTV+DEVRTG YRQ+FH
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFH 88
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 171 bits (415), Expect = 2e-43
Identities = 70/88 (79%), Positives = 82/88 (93%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMFH 357
HVPRA+FVDLEPTV+DEVRTG+YRQ+FH
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFH 88
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 85.8 bits (203), Expect = 9e-18
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = +1
Query: 205 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQMFH 357
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQ+FH
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFH 148
Score = 81.4 bits (192), Expect = 2e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 210
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 83.8 bits (198), Expect = 4e-17
Identities = 40/93 (43%), Positives = 56/93 (60%)
Frame = +1
Query: 76 QKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 255
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 256 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQMF 354
E G+ VPRAV +DLEP +D VRTG Y Q+F
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIF 265
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 80.6 bits (190), Expect = 3e-16
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 264
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 265 AGKHVPRAVFVDLEPTVVDEVRTGTYRQMF 354
G+ VPRAV +DLEP +D VRTG Y Q+F
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIF 85
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 79.8 bits (188), Expect = 6e-16
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
VPRAV +DLEP +D VRTG Y Q+F
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIF 85
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 78.2 bits (184), Expect = 2e-15
Identities = 37/87 (42%), Positives = 52/87 (59%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
+VPRAV +DLEP +D VR+G Y Q+F
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIF 85
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 76.6 bits (180), Expect = 5e-15
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
+VPRAV +DLEP +D VR+G + Q+F
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIF 85
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 76.2 bits (179), Expect = 7e-15
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
VPRAV +DLEP +D VR+G Y +F
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIF 85
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 75.4 bits (177), Expect = 1e-14
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +1
Query: 97 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 276
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 277 VPRAVFVDLEPTVVDEVRTGTYRQMFH 357
+PRA+ VDLEP V++ ++ YR +++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYN 87
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 75.4 bits (177), Expect = 1e-14
Identities = 36/87 (41%), Positives = 51/87 (58%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
VPRAV +DLEP +D VR+G + Q+F
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIF 85
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 73.7 bits (173), Expect = 4e-14
Identities = 36/87 (41%), Positives = 49/87 (56%)
Frame = +1
Query: 94 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 273
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 274 HVPRAVFVDLEPTVVDEVRTGTYRQMF 354
HVPRAV +DLEP +D +R+G +F
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIF 85
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.27
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 233 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 153
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 0.61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 230 SPPPMVLSVGI*PSGWMPCSRQYSSQ 153
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 227 PPPMVLSVGI*PSGWMPCSR 168
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 137 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 313
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 221 PMVLSVGI*PSGWMPCSRQYSSQ 153
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 128 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 292
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 140 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 301
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 190 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 285
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>03_02_0232 +
6614784-6614882,6616145-6616477,6616708-6616967,
6617328-6617469,6617567-6617938,6618056-6618187,
6618907-6619035,6619125-6621188
Length = 1176
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = -1
Query: 358 DETSVCMCQCGPRQ-----LQWVQDRRRRHGERAC 269
D++S C +CG QW R RH R+C
Sbjct: 642 DQSSCCYDECGDENGSIGDFQWQSKERTRHSARSC 676
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 4.3
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +1
Query: 103 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 282
CI + V IG C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 283 RAVFVDL 303
F+DL
Sbjct: 2796 SVCFIDL 2802
>12_02_0070 - 13164738-13164809,13165187-13165501
Length = 128
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -2
Query: 330 ADLVNYSGFKIDEDGTGNVLASSGL-----AEERVEGVVSTPD 217
A L+++ G+ + GTGN ASS E VEG V+ D
Sbjct: 23 ASLLDWLGYNCERGGTGNDAASSASRWENNGEVEVEGAVALED 65
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 5.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 145 NACWELYCLEHGI 183
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>07_01_0776 +
5983684-5983857,5983962-5984072,5984151-5984302,
5984403-5984460,5984568-5984616,5984714-5984958,
5985129-5985206,5986016-5986246
Length = 365
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 237 GVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGLANVYRDALTH 94
G + P+ + ++ I L + A+ +PAG + GLA RD + H
Sbjct: 215 GRAALPNATPNLNIGIDLWSTPPALAVPAGQGEASPGLALARRDGVAH 262
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 152 AGSCIALSTASNLMVRCQLTRPSGVET---TPSTRSS 253
AG+ + L S + VRC+ + SGVE TP+ R++
Sbjct: 17 AGAGVLLRQRSEVAVRCRAQQVSGVEAAAGTPAARAA 53
>08_02_1012 + 23550314-23551504
Length = 396
Score = 26.2 bits (55), Expect = 7.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +2
Query: 125 KPESRSEMPAGSCIA--LSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSS 298
+P S +PA +A +ST R + R + + TP + A E A+TF S
Sbjct: 171 RPASPPPVPAAPEVASAVSTPPARPKRGRPPRAAKPQPTPERQQEAEVEAAATFWTACPS 230
Query: 299 ILNPL*LTRSALAHTDRC 352
N TRS A T C
Sbjct: 231 CCNLHEYTRSYEARTLLC 248
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 26.2 bits (55), Expect = 7.6
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 119 LAKPESRSE--MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPS 292
LA ESR E +GS ++ T+ N TRPS ++P S+ P + P+
Sbjct: 283 LATHESRREDKTESGSDVSSQTSENSKAA---TRPSRTLSSPVLHRSSSPNKVLSAASPA 339
Query: 293 SSILNPL*LTRSALAHTDRC 352
S+ TR + RC
Sbjct: 340 STAFQSPLRTRPSAPCRSRC 359
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 266 APVSLKNVLKESSPPPMVLSVGI*PSGWMPCSRQYSSQQAFPI 138
+P+ K E PPP + I W P + ++QQ PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 146 MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTR 247
MP S + +L + C+L P G+ PS R
Sbjct: 808 MPVDSFVGFKYLQDLKIHCKLLCPQGMVLPPSLR 841
>04_04_0482 -
25547393-25547455,25547767-25547866,25548154-25548203,
25548883-25548969,25549343-25549429,25549510-25550009,
25550061-25550134,25550548-25551632
Length = 681
Score = 26.2 bits (55), Expect = 7.6
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -2
Query: 342 VCASADLVNYSGFKIDEDGTGNVL 271
+C+++ L++Y ++D G GNV+
Sbjct: 263 ICSTSGLLHYPDTQVDASGKGNVI 286
>03_05_1078 +
30205876-30206346,30206624-30207001,30207967-30208092,
30209569-30209805
Length = 403
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 115 HVGQAGVQIGNACWELYCLEHGIQPDGQMP 204
H G V++ AC+ L L++G + DG P
Sbjct: 373 HEGDGSVEVDEACFYLMGLDYGPKRDGFGP 402
>02_05_0391 +
28563242-28563302,28563714-28563931,28564563-28564637,
28564730-28565264,28565343-28565523,28565586-28565724,
28565826-28566067,28566157-28566322,28566591-28566698
Length = 574
Score = 26.2 bits (55), Expect = 7.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 106 CTHAFCIEFFELKCR 62
C+H+FC++ E +CR
Sbjct: 305 CSHSFCVKCMETQCR 319
>02_02_0489 + 10869482-10871218
Length = 578
Score = 26.2 bits (55), Expect = 7.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2
Query: 122 AKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSS 295
AKPE S A S S + + + + E PST ++ LA P PSS
Sbjct: 138 AKPEKSSSAAAPEPAPSSGKSKKAAKAEAAKAAAAEPAPSTGKVSKYNLAPE-PSPSS 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,970,376
Number of Sequences: 37544
Number of extensions: 252802
Number of successful extensions: 948
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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