Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J09
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 243 5e-65
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 241 2e-64
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 241 2e-64
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 215 1e-56
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 137 3e-33
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 137 3e-33
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 137 3e-33
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 136 1e-32
03_01_0034 + 318432-318825,318902-319851 136 1e-32
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 136 1e-32
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 133 7e-32
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 132 1e-31
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 98 3e-21
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 31 0.45
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 0.78
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 29 1.4
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 29 1.8
03_05_0204 - 21961332-21961715,21962030-21962374 29 1.8
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342 29 2.4
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 3.1
01_07_0182 + 41838805-41839152,41839230-41839610 28 4.2
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 27 7.3
11_04_0367 - 16840732-16843428,16844425-16844760 27 9.6
09_02_0184 - 5485231-5485743 27 9.6
02_01_0085 + 610872-611297 27 9.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 243 bits (595), Expect = 5e-65
Identities = 113/150 (75%), Positives = 129/150 (86%)
Frame = +3
Query: 9 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 188
GLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+
Sbjct: 131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLS 190
Query: 189 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 368
TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NV
Sbjct: 191 THSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINV 250
Query: 369 DLTEFQTNLVPYPRIHFPLVTYAPVISAEK 458
D+TEFQTNLVPYPRIHF L +YAPVISAEK
Sbjct: 251 DVTEFQTNLVPYPRIHFMLSSYAPVISAEK 280
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 241 bits (590), Expect = 2e-64
Identities = 110/150 (73%), Positives = 129/150 (86%)
Frame = +3
Query: 9 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 188
GLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+
Sbjct: 131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLS 190
Query: 189 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 368
TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNV
Sbjct: 191 THSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 369 DLTEFQTNLVPYPRIHFPLVTYAPVISAEK 458
D+ EFQTNLVPYPRIHF L +YAPVISAEK
Sbjct: 251 DVNEFQTNLVPYPRIHFMLSSYAPVISAEK 280
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 241 bits (590), Expect = 2e-64
Identities = 110/150 (73%), Positives = 129/150 (86%)
Frame = +3
Query: 9 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILT 188
GLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+
Sbjct: 131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLS 190
Query: 189 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 368
TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+TASLRFDGALNV
Sbjct: 191 THSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 369 DLTEFQTNLVPYPRIHFPLVTYAPVISAEK 458
D+ EFQTNLVPYPRIHF L +YAPVISAEK
Sbjct: 251 DVNEFQTNLVPYPRIHFMLSSYAPVISAEK 280
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 215 bits (526), Expect = 1e-56
Identities = 105/171 (61%), Positives = 127/171 (74%), Gaps = 21/171 (12%)
Frame = +3
Query: 9 GLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQ-------------- 146
GLQGFL+F+ LL+ERLSVDYG+KSKL F IYP+PQ
Sbjct: 191 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSD 250
Query: 147 -------VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNR 305
+STAVVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LDIERPTYTNLNR
Sbjct: 251 TQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNR 310
Query: 306 LIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEK 458
LI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EK
Sbjct: 311 LISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEK 361
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 137 bits (332), Expect = 3e-33
Identities = 61/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTS 275
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 137 bits (332), Expect = 3e-33
Identities = 61/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTS 275
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 137 bits (332), Expect = 3e-33
Identities = 61/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTS 275
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 136 bits (328), Expect = 1e-32
Identities = 60/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 310 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 369
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN D
Sbjct: 370 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 429
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 430 LRKLAVNLIPFPRLHFFMVGFAPLTS 455
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 136 bits (328), Expect = 1e-32
Identities = 60/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTS 275
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 136 bits (328), Expect = 1e-32
Identities = 60/146 (41%), Positives = 92/146 (63%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTS 275
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 133 bits (321), Expect = 7e-32
Identities = 58/146 (39%), Positives = 91/146 (62%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
+ GF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 151 MHGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 210
Query: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 371
H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN D
Sbjct: 211 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 270
Query: 372 LTEFQTNLVPYPRIHFPLVTYAPVIS 449
L + NL+P+PR+HF +V +AP+ S
Sbjct: 271 LRKLAVNLIPFPRLHFFMVGFAPLTS 296
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 132 bits (320), Expect = 1e-31
Identities = 58/144 (40%), Positives = 90/144 (62%)
Frame = +3
Query: 18 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHT 197
GF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 148 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 207
Query: 198 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLT 377
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL
Sbjct: 208 LVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLR 267
Query: 378 EFQTNLVPYPRIHFPLVTYAPVIS 449
+ NL+P+PR+HF +V +AP+ S
Sbjct: 268 KLAVNLIPFPRLHFFMVGFAPLTS 291
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 98.3 bits (234), Expect = 3e-21
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = +3
Query: 12 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILT 188
L+GF++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 132 LEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLT 191
Query: 189 THTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV 368
++DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N
Sbjct: 192 LKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNN 251
Query: 369 DLTEFQTNLVPYPRIHFPLVTYAPV 443
DL +L+P PR HF + Y P+
Sbjct: 252 DLVGLLASLIPTPRCHFLMTGYTPL 276
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 31.1 bits (67), Expect = 0.45
Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = -1
Query: 434 VRDQWEMDTWVGHQVG-LELR*IDIEGAVETQRGGNR*YDLADKTIEVGVGRAFNIQVTA 258
+++++++ T V ++ L+ D+ A+ ++ G+ DL D+ + + + +
Sbjct: 19 LKEEYKLQTGVREKINFLKSELEDMHAAL--RKVGSMHPDLLDEQVRIWASKVRELSYDM 76
Query: 257 ADVIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLGCGIDSELQFR 111
DVID F+V + ++ GC +R+V H+ CG+ ++++ R
Sbjct: 77 EDVIDAFLVRVDGSV---PANPGCLERLV-------HMMCGLFTKIKVR 115
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 222 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 344
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 5 EGPPGIPHLPLVRWWHRFWFHF 70
+GPP +P PL R RFW HF
Sbjct: 83 DGPPLLPADPLRRAMARFWVHF 104
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 388 VWNSVRSTLRAPSKRREAVIDDTIWPIRRLRL 293
+WN+ S R R EA+ID T W IR ++
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIRNAQV 344
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 8 GPPGIPHLPLVRWWHRFWFHFSPHGA 85
GPP +P P R RFW HF H A
Sbjct: 80 GPPLLPADPYHRAMARFWAHFIDHKA 105
>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
Length = 287
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 259 AVTWILNARPTPTSIVLSARSYHRLPPLCVSTAP 360
+V W+ + P P+ + +A +HR PP AP
Sbjct: 98 SVAWLFDDYPPPSPVAAAAGMHHRQPPYDGVVAP 131
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 424 SGKWIRG*GTKLVWNSVRSTLRAPSKRREAVIDDTIWPIRRLR 296
S W R W+ RS R+PS+ R D P RR R
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPR 1287
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 5 EGPPGIPHLPLVRWWHRFWFHFSPHGATL 91
+GPP +P P R RFW F H A L
Sbjct: 79 DGPPILPADPYDRATARFWAQFIDHKANL 107
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -1
Query: 185 KDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESLEAP 6
K R + L + HLGCG + A GE E R+ TTE + +EE +E P
Sbjct: 7 KARALPLDGTVEHLGCGQGVVIG----AARQGEDQVGFLQELRSMPTTESMTEEERMEPP 62
>11_04_0367 - 16840732-16843428,16844425-16844760
Length = 1010
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +3
Query: 228 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 407
V+N + + +NL + +Y+N+ + + + +S + R + L+ D + NL P
Sbjct: 574 VNNPEHFFLYCKNLRVLSLSYSNIGKALPRYISGLKLLRRLELPLDGDYLKLICNLGPTD 633
Query: 408 RIHF 419
R+ +
Sbjct: 634 RVDY 637
>09_02_0184 - 5485231-5485743
Length = 170
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 350 RRRPQCRSNGVP 385
RRRP+CRS GVP
Sbjct: 22 RRRPRCRSPGVP 33
>02_01_0085 + 610872-611297
Length = 141
Score = 26.6 bits (56), Expect = 9.6
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Frame = +1
Query: 241 PSMTSAAVTWILNARPTPTSIVLSA-RSYH----RLPPLCVSTAPSMSI*RSSRPTWCPT 405
P + A + AR TP S A R H RLPP+ + S PT CP
Sbjct: 41 PQLPITAAPAVTRARSTPDSCAWGAERRPHAPPPRLPPVVARRRSARSRAAPDPPTSCPP 100
Query: 406 HVSISHWSRTLQS 444
IS R S
Sbjct: 101 SRQISDRGRAAAS 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,124,538
Number of Sequences: 37544
Number of extensions: 306243
Number of successful extensions: 896
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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