Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J05
(258 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0343 + 28132348-28132878,28133256-28133366,28133477-281335... 49 5e-07
02_01_0316 + 2125283-2125687,2125768-2125881,2125986-2126099,212... 40 4e-04
01_04_0038 - 15339047-15339230,15339683-15339741,15340031-153401... 37 0.002
07_03_0406 + 17785046-17785408,17786411-17786479,17786764-177868... 32 0.073
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 29 0.39
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 29 0.52
06_01_0241 - 1827161-1827624,1829688-1829828,1830566-1830593,183... 29 0.52
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 29 0.68
03_02_0730 + 10784784-10785341 28 0.90
01_06_0125 + 26711157-26713297,26715026-26715206 28 1.2
10_01_0236 + 2486371-2486952 27 2.1
05_06_0148 + 25989595-25990956 27 2.1
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 27 2.1
03_02_0517 + 9054816-9055655 27 2.1
12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080... 27 2.7
08_02_0227 - 14485676-14487316 27 2.7
03_06_0194 + 32249846-32250562 26 3.6
02_01_0441 - 3191522-3191887,3193787-3193957 26 3.6
01_05_0666 + 24132641-24132768,24134854-24134860,24135042-241352... 26 3.6
12_02_0835 + 23548789-23548844,23549088-23549152,23549322-23549440 26 4.8
04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648 26 4.8
01_02_0048 - 10626467-10627498,10628522-10628617 26 4.8
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595... 25 6.3
03_05_0955 + 29168771-29170507 25 6.3
02_02_0580 + 11757667-11758258,11758419-11758572,11758682-117587... 25 6.3
02_01_0627 + 4708648-4708836,4708975-4709064,4709579-4709664,471... 25 6.3
01_05_0278 - 20313373-20313387,20314617-20315240 25 6.3
09_02_0344 - 7582312-7582559,7583761-7583779 25 8.4
05_04_0193 + 18939869-18939988,18940714-18941012,18941078-189411... 25 8.4
01_06_0306 + 28357321-28357446,28357551-28357748,28357828-283579... 25 8.4
>02_05_0343 +
28132348-28132878,28133256-28133366,28133477-28133590,
28134077-28134367,28134447-28134557,28134658-28134711,
28135587-28135666,28135749-28135864,28136491-28136605,
28136740-28136788,28136984-28137106
Length = 564
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 FREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCL-SALGDV 222
FRE+F S+ + + P L+ +GG+ +FK Y G+ A L QS QLY + + V
Sbjct: 254 FREYFLSKNFVGIHSPKLIAGSSEGGAAVFKLQYNGQPACLAQSPQLYKQMAICGGFERV 313
Query: 223 *LIAQSYRAEQS 258
+ +RAE S
Sbjct: 314 FEVGPVFRAENS 325
>02_01_0316 +
2125283-2125687,2125768-2125881,2125986-2126099,
2126271-2126561,2126658-2126768,2127317-2127370,
2127555-2127634,2127912-2128027,2128141-2128382
Length = 508
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 FREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCL-SALGDV 222
FR+ S + + P L+ +GG+ +FK Y G+ A L QS QL+ + + V
Sbjct: 213 FRQVLLSEGFVGIHTPKLIGGSSEGGAAVFKLDYNGQPACLAQSPQLHKQMAICGGFERV 272
Query: 223 *LIAQSYRAEQS 258
+ +RAE S
Sbjct: 273 FEVGPVFRAEDS 284
>01_04_0038 -
15339047-15339230,15339683-15339741,15340031-15340160,
15340248-15340498,15340632-15341225,15342050-15342511
Length = 559
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 115 DGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALGDV*LIAQSYRAEQS 258
D G+ ++ +F +A+LT S QL +ET AL V ++RAE S
Sbjct: 283 DDGTVAYENDFFKRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENS 330
>07_03_0406 +
17785046-17785408,17786411-17786479,17786764-17786868,
17787297-17787346,17787363-17787489,17788084-17788221,
17788863-17788940,17789141-17789218,17789318-17789386,
17789720-17789803,17789895-17789981,17790364-17790459,
17790541-17790615,17790762-17790888,17791027-17791142
Length = 553
Score = 31.9 bits (69), Expect = 0.073
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 145 YFGEEAYLTQSSQLYLETCLSALGDV*LIAQSYRAEQS 258
+F + A+LT S QL ET +AL DV ++RAE S
Sbjct: 312 FFCKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENS 349
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 29.5 bits (63), Expect = 0.39
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = -3
Query: 85 SLPCTGATRSVRGRRASPRPERGRLVRL 2
SLP T T S R RRASP GRL+RL
Sbjct: 20 SLPSTACTSSSR-RRASPWGGAGRLIRL 46
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 29.1 bits (62), Expect = 0.52
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = -3
Query: 256 TVPLGRTARSTIRHPKRISTSPNITV-NSVLSTPPHQSMRT*RV*SP-HRTASARGSEGS 83
T L RT + RIS+SP + +S + H + R P H + +RG S
Sbjct: 231 TPALNRTRGPSPVKTNRISSSPKLQGWHSNVPGFSHDAPANLRTSLPDHPLSHSRGGSPS 290
Query: 82 LPCTGATRSVRGRR--ASPRPER 20
P +G RGRR SP P R
Sbjct: 291 PPISGRDMGSRGRRQSLSPTPSR 313
>06_01_0241 -
1827161-1827624,1829688-1829828,1830566-1830593,
1830639-1830728
Length = 240
Score = 29.1 bits (62), Expect = 0.52
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 18 PRSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTLQVL 143
P GRG +R+ LRV G DP + +R+ +Y +++
Sbjct: 93 PGGGRGQSRMHVALRVLQEIGIAAEDPGLEGMRYKIYNWKMI 134
>06_03_0908 - 25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 28.7 bits (61), Expect = 0.68
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 57 LRVAPVHGSEPSDPRADAVRWGLYTLQVLILW*GGVLNTEFTVIFG 194
L V P+H S R +VRWG+ LQ +++ G ++++ +FG
Sbjct: 867 LSVIPIHASRSKALRYLSVRWGI-ELQNVVVLVGETGDSDYEELFG 911
>03_02_0730 + 10784784-10785341
Length = 185
Score = 28.3 bits (60), Expect = 0.90
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 27 GRGDARLPRTLRV-APVHGSEPSDPRADAVR 116
G GD R PR +R+ + + GS P PR+ A R
Sbjct: 49 GEGDVRGPREVRMSSALSGSPPDPPRSPAER 79
>01_06_0125 + 26711157-26713297,26715026-26715206
Length = 773
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 227 NYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCVCTRVGG 87
NY++ + VSK N ELC A +E S P H VC G
Sbjct: 595 NYSTGEQIHSVSK-NAELCSPTAKKALFEPGSSCTPLKHTVCPPSSG 640
>10_01_0236 + 2486371-2486952
Length = 193
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 6 RTRRPRSGRGDARLPRTLRVAPVHGSEPSDPRA 104
+ R PRSG G AR P+ R P+ + P P A
Sbjct: 110 KPRTPRSGEGQARAPQRRR--PLERAAPLPPPA 140
>05_06_0148 + 25989595-25990956
Length = 453
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 156 LTKV*ELEECRAPIALRLHEGRRAHFRVPARREVFAEGARHRGPSADASSD 4
L K E+E+ + + + EG++ R+ +E+ AE GPS A SD
Sbjct: 395 LVKAEEVEK-KVRLVMDSDEGKKLRGRLAMAKEMAAEALADGGPSCTAFSD 444
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 241 RTARSTIRHPKRISTSPNITVNSVLSTPPHQSMRT*RV*SPHR 113
RTA S IRH S P + +PP + +R+ R SP R
Sbjct: 292 RTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPRHLSPRR 334
>03_02_0517 + 9054816-9055655
Length = 279
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 70 RYTEVSPPTLVQTQCDGG 123
R+ VSP T+V +CDGG
Sbjct: 15 RFVRVSPSTVVCPECDGG 32
>12_02_0044 -
12807372-12807555,12807782-12807840,12807943-12808072,
12808160-12808224,12808318-12808506,12808574-12809119,
12809258-12809497,12809598-12810032
Length = 615
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 145 YFGEEAYLTQSSQLYLETCLSALGDV*LIAQSYRAE 252
+F AYLT L+LET AL V + ++AE
Sbjct: 346 FFHRPAYLTPCHTLHLETYACALSSVYTFSPVFQAE 381
>08_02_0227 - 14485676-14487316
Length = 546
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 176 LCVKYASSPKYENLKSVEPPSHCV 105
+C +YA YE S++PP+ C+
Sbjct: 280 ICFRYAQISSYEQSISLKPPAPCL 303
>03_06_0194 + 32249846-32250562
Length = 238
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 27 GRGDARLPRTLRVAPVHGSEPS 92
GRG R+P LR P H PS
Sbjct: 80 GRGGRRVPGVLRHTPTHAPVPS 101
>02_01_0441 - 3191522-3191887,3193787-3193957
Length = 178
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 215 PKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRD 63
P +D + + E+C+ S K L + S +C + GGL S R+D
Sbjct: 118 PGSDPVMMLDSDEVCILAESGRKQIILDAFADGSSFICLKCGGLFSTSRKD 168
>01_05_0666 +
24132641-24132768,24134854-24134860,24135042-24135230,
24136017-24136185,24136299-24136744,24137540-24137563,
24137736-24137828,24138806-24138884,24138979-24139063,
24139479-24139788,24140471-24140614
Length = 557
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 220 RHPKRISTSPNITVNSVLSTPPHQSMRT 137
R PKR+ S N+TV +V P + RT
Sbjct: 276 RPPKRVKFSENVTVQNVPLDVPERPSRT 303
>12_02_0835 + 23548789-23548844,23549088-23549152,23549322-23549440
Length = 79
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 39 ARLPRTLRVAPVHGSEPSDPRADAV 113
ARLP VAP G+ P+ +A A+
Sbjct: 53 ARLPMAAAVAPAAGATPATAKAKAI 77
>04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648
Length = 857
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 133 RV*SPHRTASARGSEGSLPCTGATRSVRGRRASPRPER 20
RV P + + +G+ P T + V+GRR + P+R
Sbjct: 579 RVPQPQQQQNQQGTRAPRPPTPTVQPVQGRRDASGPQR 616
>01_02_0048 - 10626467-10627498,10628522-10628617
Length = 375
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRDAKCSR 48
C CV A ++ + PP+ T GG+ S D + +R
Sbjct: 142 CAACVAAAHGWRFSYTPTAPPPAALAATTTGGVVSDAPLDIRATR 186
>10_06_0102 +
10758601-10758948,10759051-10759257,10759349-10759507,
10759617-10759709,10759913-10760008,10760457-10760724,
10760805-10761047,10761298-10761422,10761499-10761615,
10761705-10761779,10761886-10761942,10762035-10762139,
10762244-10762330,10762790-10763047,10763075-10763263,
10763418-10763528,10763640-10763729,10763814-10763990,
10764075-10764152,10764412-10764726,10764819-10765162,
10765304-10765541,10765631-10765998,10766106-10766316,
10766622-10766801,10766886-10769045,10769151-10769207
Length = 2251
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 143 ENLKSVEPPSHCVCTRV 93
+N +SV+P HCV RV
Sbjct: 420 DNAQSVKPKGHCVAVRV 436
>03_05_0955 + 29168771-29170507
Length = 578
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 9 TRRPRSGRGDARLPRTLRVAPVHGSEPSDPRADA 110
T PR A LP+ PV S PS ADA
Sbjct: 168 TAAPRPEAAPALLPQPAAATPVACSSPSPSSADA 201
>02_02_0580 +
11757667-11758258,11758419-11758572,11758682-11758756,
11758836-11758980,11759222-11759287,11759347-11759500,
11761506-11761624
Length = 434
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 135 EECRAPIALRLHEGRRAHFRVPARREVFAEGAR 37
E+C AP GRRA R+ EV + AR
Sbjct: 119 EQCAAPAVASPRNGRRARRRLEKEIEVEDDAAR 151
>02_01_0627 +
4708648-4708836,4708975-4709064,4709579-4709664,
4710108-4710332,4711251-4711314,4711793-4712491,
4712657-4712764,4712920-4713051,4713183-4713359,
4713920-4713973,4714072-4714134,4714227-4714928,
4715048-4715175,4715563-4715839
Length = 997
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 57 LRVAPVHGSEPSDPRADAVRWGLYTLQVLIL 149
L V P+H S R +RWG+ V +L
Sbjct: 892 LSVVPIHASRSQALRYLCIRWGIELPNVAVL 922
>01_05_0278 - 20313373-20313387,20314617-20315240
Length = 212
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 165 VRLLTKV*ELEECRAPIALRLH-EGRRAH 82
VRLL K +L+ECR I L EG R H
Sbjct: 127 VRLLGKGLQLKECRHVIVCNLQIEGGRGH 155
>09_02_0344 - 7582312-7582559,7583761-7583779
Length = 88
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGS 83
++G G+A LP +R A HGS
Sbjct: 5 KAGAGEALLPMMMRHAAAHGS 25
>05_04_0193 +
18939869-18939988,18940714-18941012,18941078-18941186,
18941874-18941999,18942178-18942218,18942614-18942744,
18943218-18943291,18944215-18944450,18944543-18944863,
18945023-18945086
Length = 506
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 102 HEGRRAHFRVPARREVFAEGARHRGPSADASS 7
HEG H R E GARH + SS
Sbjct: 431 HEGMEVHMHRADRTEEHPSGARHMDDMSSQSS 462
>01_06_0306 +
28357321-28357446,28357551-28357748,28357828-28357930,
28358665-28358735,28358820-28358924,28359372-28359405,
28359616-28359716,28360300-28360343,28360360-28360432,
28360489-28360629,28360769-28360861
Length = 362
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 61 ASRRYTEVSPPTLVQTQCDGG---STLFKFSYFGEEAYLTQSSQLYLETCLSA 210
A R ++ P + Q D G +F GEEA+L+ ++ E C++A
Sbjct: 74 AKNRGRKLMPSAVAQLALDRGFPGDLIFTPERAGEEAFLSDLKEVRPELCITA 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,153,888
Number of Sequences: 37544
Number of extensions: 130054
Number of successful extensions: 493
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 64
effective length of database: 12,390,532
effective search space used: 260201172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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