Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J05
(258 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 123 4e-29
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 123 4e-29
AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p pro... 55 2e-08
AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRN... 55 2e-08
AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA... 55 2e-08
AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p pro... 33 0.073
AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA... 33 0.073
BT016139-1|AAV37024.1| 587|Drosophila melanogaster AT30209p pro... 31 0.29
AE014134-2708|AAN10939.1| 202|Drosophila melanogaster CG31818-P... 31 0.29
AY118433-1|AAM48462.1| 233|Drosophila melanogaster RH40632p pro... 27 2.7
AE014298-1813|AAF48203.2| 233|Drosophila melanogaster CG32647-P... 27 2.7
AE014298-1812|AAF48202.2| 233|Drosophila melanogaster CG32647-P... 27 2.7
AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA... 27 2.7
BT021323-1|AAX33471.1| 1301|Drosophila melanogaster RE07880p pro... 27 3.6
BT011145-1|AAR82813.1| 938|Drosophila melanogaster GH25621p pro... 27 3.6
AF145616-1|AAD38591.1| 1224|Drosophila melanogaster BcDNA.GH0348... 27 3.6
AE013599-1983|AAF58183.1| 1042|Drosophila melanogaster CG10249-P... 27 3.6
AE013599-1982|AAF58182.1| 1224|Drosophila melanogaster CG10249-P... 27 3.6
AE013599-1981|AAM68539.2| 1301|Drosophila melanogaster CG10249-P... 27 3.6
BT022711-1|AAY55127.1| 299|Drosophila melanogaster IP12323p pro... 27 4.8
BT022644-1|AAY55060.1| 319|Drosophila melanogaster IP12023p pro... 27 4.8
AE014298-782|AAF46071.1| 478|Drosophila melanogaster CG15773-PA... 27 4.8
AY069230-1|AAL39375.1| 172|Drosophila melanogaster GH27769p pro... 26 6.3
AE014296-3129|AAF49172.1| 681|Drosophila melanogaster CG9619-PA... 26 6.3
BT003566-1|AAO39570.1| 1463|Drosophila melanogaster LP02166p pro... 26 8.4
AY118676-1|AAM50536.1| 990|Drosophila melanogaster AT06247p pro... 26 8.4
AY118338-1|AAM48367.1| 975|Drosophila melanogaster LD43649p pro... 26 8.4
AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p pro... 26 8.4
AY060854-1|AAL28402.1| 570|Drosophila melanogaster GM03132p pro... 26 8.4
AY051570-1|AAK92994.1| 970|Drosophila melanogaster GH21817p pro... 26 8.4
AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA... 26 8.4
AE014297-1295|AAN13504.1| 970|Drosophila melanogaster CG5270-PA... 26 8.4
AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB... 26 8.4
AE014134-2693|AAF53518.2| 570|Drosophila melanogaster CG4249-PA... 26 8.4
AE013599-1855|AAF58273.2| 975|Drosophila melanogaster CG8494-PA... 26 8.4
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 123 bits (296), Expect = 4e-29
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = +1
Query: 37 TRAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALG 216
T+AFR H+ +R Y EV+PPTLVQTQ +GGSTLFK YFGEEAYLTQSSQLYLETCL ALG
Sbjct: 263 TQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAYLTQSSQLYLETCLPALG 322
Query: 217 DV*LIAQSYRAEQS 258
DV I+QSYRAEQS
Sbjct: 323 DVFTISQSYRAEQS 336
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 123 bits (296), Expect = 4e-29
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = +1
Query: 37 TRAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALG 216
T+AFR H+ +R Y EV+PPTLVQTQ +GGSTLFK YFGEEAYLTQSSQLYLETCL ALG
Sbjct: 263 TQAFRGHYEARGYNEVTPPTLVQTQVEGGSTLFKLKYFGEEAYLTQSSQLYLETCLPALG 322
Query: 217 DV*LIAQSYRAEQS 258
DV I+QSYRAEQS
Sbjct: 323 DVFTISQSYRAEQS 336
>AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p
protein.
Length = 531
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 40 RAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALGD 219
R FR+ + +TE+ P ++ +GG+ +F SYF + AYL QS QLY + ++A D
Sbjct: 234 RLFRDILTEQGFTEIHTPKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFD 293
Query: 220 -V*LIAQSYRAEQS 258
V + +RAE S
Sbjct: 294 KVYTVGAVFRAEDS 307
>AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRNA
synthetase protein.
Length = 531
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 40 RAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALGD 219
R FR+ + +TE+ P ++ +GG+ +F SYF + AYL QS QLY + ++A D
Sbjct: 234 RLFRDILTEQGFTEIHTPKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFD 293
Query: 220 -V*LIAQSYRAEQS 258
V + +RAE S
Sbjct: 294 KVYTVGAVFRAEDS 307
>AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA
protein.
Length = 531
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 40 RAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALGD 219
R FR+ + +TE+ P ++ +GG+ +F SYF + AYL QS QLY + ++A D
Sbjct: 234 RLFRDILTEQGFTEIHTPKIISAASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFD 293
Query: 220 -V*LIAQSYRAEQS 258
V + +RAE S
Sbjct: 294 KVYTVGAVFRAEDS 307
>AY071089-1|AAL48711.1| 460|Drosophila melanogaster RE15573p
protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.073
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 142 SYFGEEAYLTQSSQLYLETCLSALGDV*LIAQSYRAEQS 258
SYF + +L+ S QL+LE LG ++ ++RAE S
Sbjct: 200 SYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENS 238
>AE013599-2392|AAF57921.1| 460|Drosophila melanogaster CG6796-PA
protein.
Length = 460
Score = 32.7 bits (71), Expect = 0.073
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 142 SYFGEEAYLTQSSQLYLETCLSALGDV*LIAQSYRAEQS 258
SYF + +L+ S QL+LE LG ++ ++RAE S
Sbjct: 200 SYFDSKVFLSVSGQLHLEAMTYGLGKTYTLSPAFRAENS 238
>BT016139-1|AAV37024.1| 587|Drosophila melanogaster AT30209p
protein.
Length = 587
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 191 KYNCELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSV 75
K N C K A SP EN +S + + C+C G T V
Sbjct: 442 KANTCRCCKCAPSPDAENDESFDEDAECICNHEGKCTCV 480
>AE014134-2708|AAN10939.1| 202|Drosophila melanogaster CG31818-PA
protein.
Length = 202
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 191 KYNCELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSV 75
K N C K A SP EN +S + + C+C G T V
Sbjct: 57 KANTCRCCKCAPSPDAENDESFDEDAECICNHEGKCTCV 95
>AY118433-1|AAM48462.1| 233|Drosophila melanogaster RH40632p
protein.
Length = 233
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVG 90
C LCV Y S P + +PP C RVG
Sbjct: 143 CSLCVCYHSEPLWCKAIYCDPPYFCKNFRVG 173
>AE014298-1813|AAF48203.2| 233|Drosophila melanogaster CG32647-PB,
isoform B protein.
Length = 233
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVG 90
C LCV Y S P + +PP C RVG
Sbjct: 143 CSLCVCYHSEPLWCKAIYCDPPYFCKNFRVG 173
>AE014298-1812|AAF48202.2| 233|Drosophila melanogaster CG32647-PA,
isoform A protein.
Length = 233
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVG 90
C LCV Y S P + +PP C RVG
Sbjct: 143 CSLCVCYHSEPLWCKAIYCDPPYFCKNFRVG 173
>AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA
protein.
Length = 1316
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -3
Query: 238 TARSTIRHPKRISTSPNITVNSVLSTPPHQSMRT*RV*SPHRTASARGSEGSLPCTG 68
T RST R P + +T+ + T S S PP T V + T S+ S S TG
Sbjct: 489 TRRSTTRPPTKSTTTISATTASPASNPPVNGTGT--VQATSITTSSSSSSSSSTSTG 543
>BT021323-1|AAX33471.1| 1301|Drosophila melanogaster RE07880p
protein.
Length = 1301
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 833 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 865
>BT011145-1|AAR82813.1| 938|Drosophila melanogaster GH25621p
protein.
Length = 938
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 578 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 610
>AF145616-1|AAD38591.1| 1224|Drosophila melanogaster BcDNA.GH03482
protein.
Length = 1224
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 756 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 788
>AE013599-1983|AAF58183.1| 1042|Drosophila melanogaster CG10249-PB,
isoform B protein.
Length = 1042
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 574 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 606
>AE013599-1982|AAF58182.1| 1224|Drosophila melanogaster CG10249-PA,
isoform A protein.
Length = 1224
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 756 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 788
>AE013599-1981|AAM68539.2| 1301|Drosophila melanogaster CG10249-PC,
isoform C protein.
Length = 1301
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 21 RSGRGDARLPRTLRVAPVHGSEPSDPRADAVRWGLYTL 134
RS D+R+PR P H S PS R + +R YTL
Sbjct: 833 RSTSADSRIPR-----PKHLSSPSPVRKEFMRQNTYTL 865
>BT022711-1|AAY55127.1| 299|Drosophila melanogaster IP12323p
protein.
Length = 299
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 227 NYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPS 114
NY A+K V++ C C +P + L+ +PP+
Sbjct: 152 NYNGCNAEKTVTELRCLQCTHNRLAPNPDCLRDQDPPA 189
>BT022644-1|AAY55060.1| 319|Drosophila melanogaster IP12023p
protein.
Length = 319
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 227 NYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPS 114
NY A+K V++ C C +P + L+ +PP+
Sbjct: 172 NYNGCNAEKTVTELRCLQCTHNRLAPNPDCLRDQDPPA 209
>AE014298-782|AAF46071.1| 478|Drosophila melanogaster CG15773-PA
protein.
Length = 478
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 227 NYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPS 114
NY A+K V++ C C +P + L+ +PP+
Sbjct: 172 NYNGCNAEKTVTELRCLQCTHNRLAPNPDCLRDQDPPA 209
>AY069230-1|AAL39375.1| 172|Drosophila melanogaster GH27769p
protein.
Length = 172
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 67 RRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQ 174
R Y ++ V+ CDG S +F F FG ++ Q
Sbjct: 62 RSYADLQA-NYVENSCDGFSDIFTFVLFGNSLHVGQ 96
>AE014296-3129|AAF49172.1| 681|Drosophila melanogaster CG9619-PA
protein.
Length = 681
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 67 RRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQ 174
R Y ++ V+ CDG S +F F FG ++ Q
Sbjct: 571 RSYADLQA-NYVENSCDGFSDIFTFVLFGNSLHVGQ 605
>BT003566-1|AAO39570.1| 1463|Drosophila melanogaster LP02166p
protein.
Length = 1463
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRD--AKCSR 48
C V +P + E SHC+C R T + RR +C R
Sbjct: 646 CGAFVMPKQAPNRQQWTRDEEASHCMCCRRAAFTMLMRRHHCRRCGR 692
>AY118676-1|AAM50536.1| 990|Drosophila melanogaster AT06247p
protein.
Length = 990
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 239 DCAINYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCV 105
DC ++ S K + Y+CE C K + KY + ++ P C+
Sbjct: 412 DCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTL-PEVLCI 455
>AY118338-1|AAM48367.1| 975|Drosophila melanogaster LD43649p
protein.
Length = 975
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 239 DCAINYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCV 105
DC ++ S K + Y+CE C K + KY + ++ P C+
Sbjct: 397 DCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTL-PEVLCI 440
>AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p
protein.
Length = 491
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 94 TLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLY 189
TL T D G TL + G+E Y+T + LY
Sbjct: 149 TLSGTNSDSGLTLQPPDFAGKEKYVTDCNLLY 180
>AY060854-1|AAL28402.1| 570|Drosophila melanogaster GM03132p
protein.
Length = 570
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 239 DCAINYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCVC 102
D I YT + KH KY E + PK +L+ +PP +C
Sbjct: 334 DKRIEYTREQLVKHRQKYMEEYLSRNVIVPKSSDLR--KPPKELLC 377
>AY051570-1|AAK92994.1| 970|Drosophila melanogaster GH21817p
protein.
Length = 970
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRD--AKCSR 48
C V +P + E SHC+C R T + RR +C R
Sbjct: 153 CGAFVMPKQAPNRQQWTRDEEASHCMCCRRAAFTMLMRRHHCRRCGR 199
>AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA
protein.
Length = 491
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 94 TLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLY 189
TL T D G TL + G+E Y+T + LY
Sbjct: 149 TLSGTNSDSGLTLQPPDFAGKEKYVTDCNLLY 180
>AE014297-1295|AAN13504.1| 970|Drosophila melanogaster CG5270-PA,
isoform A protein.
Length = 970
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRD--AKCSR 48
C V +P + E SHC+C R T + RR +C R
Sbjct: 153 CGAFVMPKQAPNRQQWTRDEEASHCMCCRRAAFTMLMRRHHCRRCGR 199
>AE014297-1294|AAF54635.3| 2243|Drosophila melanogaster CG5270-PB,
isoform B protein.
Length = 2243
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -2
Query: 182 CELCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSVYRRD--AKCSR 48
C V +P + E SHC+C R T + RR +C R
Sbjct: 1426 CGAFVMPKQAPNRQQWTRDEEASHCMCCRRAAFTMLMRRHHCRRCGR 1472
>AE014134-2693|AAF53518.2| 570|Drosophila melanogaster CG4249-PA
protein.
Length = 570
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 239 DCAINYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCVC 102
D I YT + KH KY E + PK +L+ +PP +C
Sbjct: 334 DKRIEYTREQLVKHRQKYMEEYLSRNVIVPKSSDLR--KPPKELLC 377
>AE013599-1855|AAF58273.2| 975|Drosophila melanogaster CG8494-PA
protein.
Length = 975
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 239 DCAINYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPSHCV 105
DC ++ S K + Y+CE C K + KY + ++ P C+
Sbjct: 397 DCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTL-PEVLCI 440
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,524,237
Number of Sequences: 53049
Number of extensions: 209630
Number of successful extensions: 780
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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