Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J05
(258 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 114 9e-27
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 48 1e-06
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 40 3e-04
Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF016452-5|AAB66017.2| 210|Caenorhabditis elegans Hypothetical ... 26 3.2
L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical p... 26 4.2
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical... 25 5.6
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 25 5.6
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 25 5.6
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 25 5.6
AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm rec... 25 5.6
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z73425-1|CAA97784.1| 97|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 25 7.4
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 25 7.4
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 25 7.4
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 25 7.4
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 25 7.4
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 25 9.8
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 25 9.8
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 25 9.8
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 114 bits (274), Expect = 9e-27
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = +1
Query: 37 TRAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSALG 216
TRA R+HF + YTEV+PPTLVQTQ +GGSTLF Y+GE AYLTQSSQLYLETC +ALG
Sbjct: 249 TRAMRDHFFAAGYTEVAPPTLVQTQVEGGSTLFGLDYYGEPAYLTQSSQLYLETCNAALG 308
Query: 217 DV*LIAQSYRAEQS 258
DV I+QSYRAE+S
Sbjct: 309 DVYCISQSYRAEKS 322
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 47.6 bits (108), Expect = 1e-06
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 FREHFASRRYTEVSPPTLVQTQCDGGSTLFKFSYFGEEAYLTQSSQLYLETCLSA-LGDV 222
FR R + E+ P ++ +GG+ +F+ SYF AYL QS QLY + ++ V
Sbjct: 236 FRNILDVRGFVEIMAPKIISAPSEGGANVFEVSYFKGSAYLAQSPQLYKQMAIAGDFEKV 295
Query: 223 *LIAQSYRAEQS 258
I +RAE S
Sbjct: 296 YTIGPVFRAEDS 307
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 39.5 bits (88), Expect = 3e-04
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Frame = +1
Query: 40 RAFREHFASRRYTEVSPPTLVQTQCDGGSTLFKF-----------SYFGEEAYLTQSSQL 186
R E F SR + + P L + C+GG +F E +L+ SSQL
Sbjct: 127 RETHEFFMSRDFIHIDTPKLTRNDCEGGGEVFDVVTTTSTEAGDGGLKEEPMFLSVSSQL 186
Query: 187 YLETCLSALGDV*LIAQSYRAEQ 255
+LE +S L V ++ S+RAE+
Sbjct: 187 HLEAMVSRLQRVYILGPSFRAER 209
>Z81070-3|CAB02998.1| 408|Caenorhabditis elegans Hypothetical
protein F26E4.4 protein.
Length = 408
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 124 SPHRTASARGSEGSLPCTGATRSVRGRRASPRPER 20
+P + + RG S G R RGR A PRP++
Sbjct: 17 APAQQKNNRGGSTSTRGAGRGRGARGRGAGPRPKQ 51
>AF016452-5|AAB66017.2| 210|Caenorhabditis elegans Hypothetical
protein T05H4.11 protein.
Length = 210
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 91 EGSLPCTGATRSVRGRRASPRPERGRLV 8
+G LPCT + + R RRAS E V
Sbjct: 170 KGVLPCTNSQKVSRSRRASKSEEENDFV 197
>L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical
protein F10E9.10 protein.
Length = 203
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 176 LCVKYASSPKYENLKSVEPPSHCVCTRVGGLTSV 75
+ + Y+SS +E PS +C+ +GG++SV
Sbjct: 82 IAIYYSSSSCVLTFNFMEMPSAVLCSLLGGISSV 115
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 185 NCELCVKYASSPKYENLKSVEPPSH 111
N E Y+SS +YE +V PSH
Sbjct: 591 NAEDTTDYSSSDQYERTSNVMKPSH 615
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 185 NCELCVKYASSPKYENLKSVEPPSH 111
N E Y+SS +YE +V PSH
Sbjct: 497 NAEDTTDYSSSDQYERTSNVMKPSH 521
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 185 NCELCVKYASSPKYENLKSVEPPSH 111
N E Y+SS +YE +V PSH
Sbjct: 591 NAEDTTDYSSSDQYERTSNVMKPSH 615
>AL117202-23|CAB97239.2| 1428|Caenorhabditis elegans Hypothetical
protein Y47D3A.29 protein.
Length = 1428
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 227 NYTSPKADKHVSKYNCELCVKYASSPKYENLKSVEPPS 114
NY+ PKA KY E+ ++ + KY PP+
Sbjct: 484 NYSDPKAKTSNCKYEFEVDMEKMRNIKYLESSDAPPPT 521
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 185 NCELCVKYASSPKYENLKSVEPPSH 111
N E Y+SS +YE +V PSH
Sbjct: 497 NAEDTTDYSSSDQYERTSNVMKPSH 521
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 141 ELEECRAPIALRLHEGRRAHFRVPARREV 55
E+E C+A + RL+ GRR PA+++V
Sbjct: 88 EMESCQAELQARLNNGRR-ETPPPAQQDV 115
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -3
Query: 238 TARSTIRHPKRISTSPNITVNSVLSTPPHQSMRT*RV*SPHRTASARGSEGSLPCTGATR 59
T + + + PN + V +TPP ++ + V P++ SA + S G
Sbjct: 773 TRKRVVEEAAEVQKKPNPAPSGVTATPPKKAKTSNSV-PPNKMVSAASTPSSSSTPGPAS 831
Query: 58 SVRGR 44
+ GR
Sbjct: 832 TSVGR 836
>AF000299-10|AAC47986.1| 338|Caenorhabditis elegans Seven tm
receptor protein 162 protein.
Length = 338
Score = 25.4 bits (53), Expect = 5.6
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = -2
Query: 230 INYTSPKADKHVSKYNCELC 171
+ +++PK D+++ Y C +C
Sbjct: 77 LQFSNPKVDRYILYYGCGIC 96
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 254 CSAR*DCAINYTSPKADKHVSKYNCELCVKYASSPKYE 141
C A DC +Y + + DK+ + + E K KYE
Sbjct: 199 CPAPYDCDASYEAKEVDKYQNNNDYETSHKVLVKSKYE 236
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 254 CSAR*DCAINYTSPKADKHVSKYNCELCVKYASSPKYE 141
C A DC +Y + + DK+ + + E K KYE
Sbjct: 199 CPAPYDCDASYEAKEVDKYQNNNDYETSHKVLVKSKYE 236
>Z73425-1|CAA97784.1| 97|Caenorhabditis elegans Hypothetical
protein F12F6.2 protein.
Length = 97
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 60 RVAPVHGSEPSDPRADAVR 116
RVA G++PS P AD +R
Sbjct: 19 RVAKKRGNQPSQPAADVMR 37
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 238 TARSTIRHPKRISTSPN 188
T +T HPKR ST+PN
Sbjct: 351 TRATTSNHPKRPSTAPN 367
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 241 RTARSTIRHPKRISTSPNITVNSVLSTPPHQSM 143
R RST R P + ++P T+ STP H+ M
Sbjct: 398 RETRSTRRSPSKGPSAPAYTLPFGGSTPNHEPM 430
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 221 TSPKADKHVSKYNCELCVKYASSPKYENL 135
T ++D HVSK + VK AS P+ +L
Sbjct: 349 TKSQSDVHVSKRAAKKLVKQASEPERRDL 377
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 221 TSPKADKHVSKYNCELCVKYASSPKYENL 135
T ++D HVSK + VK AS P+ +L
Sbjct: 445 TKSQSDVHVSKRAAKKLVKQASEPERRDL 473
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical
protein F28E10.1a protein.
Length = 1134
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 221 TSPKADKHVSKYNCELCVKYASSPKYENL 135
T ++D HVSK + VK AS P+ +L
Sbjct: 491 TKSQSDVHVSKRAAKKLVKQASEPERRDL 519
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 166 STPPHQSMRT*RV*SPHRTASARGSEGSLPCTGATRSVRGRRASPRPER 20
S+P S R R SP R R S P + S RR SP P +
Sbjct: 482 SSPMVASPRRRRSPSPERQRKRRSPSDSPPTRRLSTSPIRRRRSPSPNK 530
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 236 CAINYTSPKADKH--VSKYNCELCVKYASSPKYENL 135
C ++T +A H ++ YN LC K ++ +EN+
Sbjct: 144 CPEHFTCEQAVNHQMLTTYNMHLCCKTSTLDSFENV 179
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -3
Query: 166 STPPHQSMRT*RV*SPHRTASARGSEGSLPCTGATRSVRGRRASPRPER 20
S+P S R R SP R R S P + S RR SP P +
Sbjct: 482 SSPMVASPRRRRSPSPERQRKRRSPSDSPPTRRLSTSPIRRRRSPSPNK 530
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,624,179
Number of Sequences: 27780
Number of extensions: 98268
Number of successful extensions: 318
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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