Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J05
         (258 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.15 
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   4.3  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          19   9.8  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              19   9.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   9.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   9.8  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    19   9.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.15
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 256 TVPLGRTARSTIRHPKRISTSPNITVNSVLSTPPHQ 149
           T+    T  +T       +T+PN T N+  +TPP Q
Sbjct: 657 TITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQ 692



 Score = 21.4 bits (43), Expect = 1.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 232 RSTIRHPKRISTSPNITVNSVLSTPPHQSMRT*RV*SPHRTASAR 98
           R  +   KR+S S    VN   S PPHQ +   +   P   A A+
Sbjct: 789 RRLMSEDKRLSKS----VNGDQSQPPHQQLHHHQSTHPQAQAQAQ 829


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = -3

Query: 256 TVPLGRTARSTIRHPKRISTSPNITVNSVLSTPPHQSMRT 137
           TVP+GR     ++    ++ +P      V S   H    T
Sbjct: 261 TVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALT 300


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 81  FRVPARREVFAEGARHRGPS 22
           F  P  R+ FAE     GPS
Sbjct: 391 FEPPQIRQAFAEETLQPGPS 410


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 196 SPNITVNSVL 167
           SPN T+NSV+
Sbjct: 84  SPNRTINSVV 93


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 257 DCSAR*DCAINYTSPKADKHVSKY 186
           +CSA  D  I+  S K  K  +KY
Sbjct: 103 ECSAISDADIHLKSSKLIKCFAKY 126


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 217 HPKRISTSPNITVNSVLSTPPHQSM 143
           H   +STSP+    +V   PP+  +
Sbjct: 79  HSNLLSTSPSGQNKAVAPYPPNHPL 103



 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 203 KHVSKYNCELC 171
           KH   Y+CE C
Sbjct: 120 KHYGVYSCEGC 130


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 217 HPKRISTSPNITVNSVLSTPPHQSM 143
           H   +STSP+    +V   PP+  +
Sbjct: 79  HSNLLSTSPSGQNKAVAPYPPNHPL 103



 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 203 KHVSKYNCELC 171
           KH   Y+CE C
Sbjct: 120 KHYGVYSCEGC 130


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 247 LGRTARSTIRHPKRIST 197
           LGR A +T   P+RI T
Sbjct: 29  LGRPAANTKLGPQRIHT 45


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
          protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 69 PVHGSEP 89
          P+HG+EP
Sbjct: 53 PIHGTEP 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,713
Number of Sequences: 438
Number of extensions: 1378
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)