Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J03
         (297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   0.60 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   1.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   3.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   5.6  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    21   7.4  
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    21   9.8  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    21   9.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    21   9.8  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 197 KEARRPRAGLSPPANGESLSWIPTIRRMKNTL 102
           ++ RRP+A L      E L+W    R++++T+
Sbjct: 217 RKIRRPKADLIEVVPQEGLTWDSVYRKVRDTV 248


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 132  TYYKKDEKHAFLISFYCITH 73
            ++YK+  KH+ + + Y +TH
Sbjct: 3109 SHYKRTSKHSMIENCYPVTH 3128


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +1

Query: 130 GIQERDSPLAGGDSPARGRRASFNKACEALHTPKGRRQSTDTK 258
           G  +RD P+   ++P       +++  E   +  G+R+S   K
Sbjct: 211 GHMKRDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPK 253


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 185 RPRAGLSPPANGESLSWIPTIRR 117
           RPRA  +PPA    +   PT R+
Sbjct: 507 RPRARRNPPATTRPVRHRPTRRK 529


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 187 RASFNKACEALHTPKGRRQSTDTKKNETESP 279
           R   +K+  A+H P+G R +   + +E  SP
Sbjct: 823 RIVVSKSANAMHPPRGSRHT--RQGSEASSP 851


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 196 RKRGDPELGYHHRLTENL 143
           R+R DP   YH R  E L
Sbjct: 109 RERWDPSGEYHRRFEEYL 126


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 196 RKRGDPELGYHHRLTENL 143
           R+R DP   YH R  E L
Sbjct: 109 RERWDPSGEYHRRFEEYL 126


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 166  DSPARGRRASFNKACEALHTPKGRRQSTDTK 258
            D PA  RRA+ N+   A    +   Q  D +
Sbjct: 1044 DDPAAARRAARNRQARARRAQERAEQLGDVE 1074


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,728
Number of Sequences: 2352
Number of extensions: 6457
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)