Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J03
         (297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   0.60 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   1.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   5.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    20   7.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   9.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   9.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                19   9.8  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 230 FGVCKASQALLKEARRPRAGLSPPANGESLSWIP 129
           FG+   S  L K ARR    L+ P N    +W P
Sbjct: 491 FGI--PSSTLYKIARREGIRLAAPFNASPTTWSP 522


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 264 ILLSISGLPPAFRRV*SLTGFVEGSA 187
           +LL ISGLPP    + S   +V G A
Sbjct: 100 LLLLISGLPPEIYYIWSHFPYVFGEA 125


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 170 LSPPANGESLSWIPTIRRMKNTLF*SP 90
           +SP      L+W+P +  M+ T + +P
Sbjct: 346 MSPWVRQVFLNWMPRLLMMRRTPYSTP 372


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 211  EALHTPKGRRQSTDTKKNE 267
            E LH PK +  S  +++NE
Sbjct: 1484 EKLHIPKDKSVSVLSRENE 1502


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 19.8 bits (39), Expect = 7.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 272 SVSFFLVSVDCRLPFGVC 219
           ++ +F +S+   LP+G C
Sbjct: 84  AIFYFFMSMRSELPWGSC 101


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 109 TRFSNLLLLYNTCLYF 62
           T+F  L  LY  C YF
Sbjct: 154 TKFIQLPPLYEMCPYF 169


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 109 TRFSNLLLLYNTCLYF 62
           T+F  L  LY  C YF
Sbjct: 154 TKFIQLPPLYEMCPYF 169


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 19.4 bits (38), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 241 AACLSACVKPHRLC*RKRGDPEL 173
           A  + A VKP  +   K G P+L
Sbjct: 174 AGIVHADVKPKNILMSKNGQPKL 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,274
Number of Sequences: 438
Number of extensions: 1578
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6119169
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)