Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J02
(358 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 193 7e-49
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 184 5e-46
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 165 2e-40
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 153 9e-37
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 132 2e-30
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 113 6e-25
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 111 3e-24
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 108 2e-23
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 95 4e-19
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 94 6e-19
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 83 1e-15
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 82 2e-15
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 81 4e-15
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 78 5e-14
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 78 5e-14
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 76 2e-13
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 75 5e-13
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 71 4e-12
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 71 6e-12
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 69 3e-11
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 69 3e-11
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 67 1e-10
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 66 2e-10
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 63 2e-09
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 58 4e-08
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 56 1e-07
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 54 1e-06
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 53 1e-06
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 49 2e-05
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 48 5e-05
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 45 3e-04
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 44 8e-04
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 42 0.002
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 41 0.005
UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2; ... 41 0.007
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.010
UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.010
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 40 0.017
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 39 0.022
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 38 0.067
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 38 0.067
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 37 0.089
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 36 0.21
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 36 0.27
UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11; Bac... 34 0.63
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 34 0.63
UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4; Thermo... 34 0.63
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 34 0.83
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 34 0.83
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 1.1
UniRef50_Q22CV0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3; Lactob... 33 1.5
UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1; Hy... 33 1.5
UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lambli... 33 1.9
UniRef50_Q4N2T6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_P55768 Cluster: Probable ribosomal protein in infB 5're... 33 1.9
UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 32 2.5
UniRef50_O70789 Cluster: Pns10-2; n=1; Oat sterile dwarf virus|R... 32 3.4
UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein; ... 31 4.4
UniRef50_A6CL35 Cluster: Putative uncharacterized protein; n=2; ... 31 4.4
UniRef50_Q5NA63 Cluster: Putative uncharacterized protein OSJNBa... 31 4.4
UniRef50_A6R7Z2 Cluster: Putative uncharacterized protein; n=3; ... 31 4.4
UniRef50_Q67JT7 Cluster: Ribosomal protein L7AE family; n=3; Fir... 31 5.9
UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1; Pedioc... 31 5.9
UniRef50_A4B625 Cluster: Putative uncharacterized protein; n=1; ... 31 5.9
UniRef50_A0RUR4 Cluster: Ribosomal protein L30E; n=1; Cenarchaeu... 31 5.9
UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic... 31 7.7
UniRef50_A1KBS6 Cluster: Sensor protein; n=1; Azoarcus sp. BH72|... 31 7.7
UniRef50_A7DR42 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 31 7.7
UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1; Cenarch... 31 7.7
UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1; C... 31 7.7
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 193 bits (471), Expect = 7e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 184 bits (447), Expect = 5e-46
Identities = 85/100 (85%), Positives = 93/100 (93%)
Frame = +3
Query: 57 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYA 236
K+++KT+ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 237 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+LAKTGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDI
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDI 101
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 165 bits (401), Expect = 2e-40
Identities = 75/104 (72%), Positives = 87/104 (83%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MV KK KK+ E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDI
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDI 104
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 153 bits (371), Expect = 9e-37
Identities = 65/101 (64%), Positives = 87/101 (86%)
Frame = +3
Query: 54 AKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYY 233
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+RK+EIEYY
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYY 61
Query: 234 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
L+KT +HHYSGNN++LGTACG+++R C L+ITD GDSDI
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 132 bits (318), Expect = 2e-30
Identities = 62/96 (64%), Positives = 79/96 (82%)
Frame = +3
Query: 69 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAK 248
K+ ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P LRKSE+EYYA+L+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 249 TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
T V+++ G N ELGTA GK +RV ++I + GDSDI
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDI 100
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 113 bits (273), Expect = 6e-25
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +3
Query: 60 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYAL 239
K K T E ++S+L +++K+GK+ GYK TLK LR GK K++II N PLRK E+EYYA+
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAM 64
Query: 240 LAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 347
L K VHH+ GNN++LG +CGK Y L IT+ G+
Sbjct: 65 LNKCHVHHFYGNNVDLGLSCGKSYGCSCLGITESGE 100
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 111 bits (267), Expect = 3e-24
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = +3
Query: 57 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYA 236
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P +S IEYYA
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYYA 63
Query: 237 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+L+ + + G+N++LGTACGKY+R ++I D G+S+I
Sbjct: 64 MLSGCDILPFDGDNVDLGTACGKYFRSSVISIIDAGESEI 103
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 108 bits (260), Expect = 2e-23
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +3
Query: 207 LRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
LRKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 71 LRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 120
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 94.7 bits (225), Expect = 4e-19
Identities = 44/97 (45%), Positives = 66/97 (68%)
Frame = +3
Query: 66 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA 245
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL KS+++Y L+
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLS 67
Query: 246 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
KT V ++G++ ELG A G+ + V + I + GD+D+
Sbjct: 68 KTPVRVFAGSSRELGIAVGRQFNVSIMTILEAGDADL 104
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 94.3 bits (224), Expect = 6e-19
Identities = 41/72 (56%), Positives = 56/72 (77%)
Frame = +3
Query: 78 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGV 257
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +RK++IEYYA+LA+ +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITI 67
Query: 258 HHYSGNNIELGT 293
Y GNN++LGT
Sbjct: 68 VLYQGNNVDLGT 79
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 83.4 bits (197), Expect = 1e-15
Identities = 39/91 (42%), Positives = 60/91 (65%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
I+ + + + +G LG K+T+++L+ GK KLV++A N P K +IEYYA L++ V+
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYT 62
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ G ++ELG+ CGK + V L I DPGDS I
Sbjct: 63 HEGTSVELGSVCGKPFTVGALLIQDPGDSTI 93
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 82.2 bits (194), Expect = 2e-15
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGN 275
L M++GK LG +T++ + G AKL+I+A+NAP K +I YYA L+ V+ + G
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGT 66
Query: 276 NIELGTACGKYYRVCTLAITDPGDSDI 356
++ELGT GK + V +LAI DPG+S I
Sbjct: 67 SVELGTLLGKPFVVASLAIVDPGESKI 93
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 81.4 bits (192), Expect = 4e-15
Identities = 37/94 (39%), Positives = 60/94 (63%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTG 254
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P + +IEYYA LA
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVP 60
Query: 255 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
V Y G +++LG CG+ + V ++A+ D G+SD+
Sbjct: 61 VFVYPGTSMDLGDVCGRPHVVASMAVLDDGESDL 94
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 77.8 bits (183), Expect = 5e-14
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
I L + + +G +G+++T + L G KLVIIA NAP K +IEYYA LA +
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAPKWAKDDIEYYAKLAGIPIFV 66
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ G++IELG A + +++ LA+ DPG S+I
Sbjct: 67 FPGSSIELGAAAKRPHKIMALAVIDPGQSEI 97
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/92 (38%), Positives = 57/92 (61%)
Frame = +3
Query: 81 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVH 260
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA N PP + ++EYYA LA +
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPII 61
Query: 261 HYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
Y G +++G G+ + V LA+ D G S I
Sbjct: 62 VYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRI 93
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 76.2 bits (179), Expect = 2e-13
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
I+ L + + +GK +G+++T K L G KL+I+A NAP + +IEYYA LA +
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFV 63
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ G++IELG A + +++ LA+ D G S+I
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVIDAGQSEI 94
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 74.5 bits (175), Expect = 5e-13
Identities = 37/90 (41%), Positives = 56/90 (62%)
Frame = +3
Query: 87 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHY 266
N+ L +K+G LG T K +++GKA++V+IA N P +S++ Y L +H +
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCPENFRSQLGSYENLF---IHTF 60
Query: 267 SGNNIELGTACGKYYRVCTLAITDPGDSDI 356
G+++ LG ACGK + V TLAI PG+SDI
Sbjct: 61 EGSSVALGKACGKPFMVSTLAIVSPGESDI 90
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 71.3 bits (167), Expect = 4e-12
Identities = 32/91 (35%), Positives = 55/91 (60%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
+N + + +GK LG K+T+K ++ G+ KLV++A N P + +++YYA L+ V+
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ ++ELG CGK + V L + D G S+I
Sbjct: 69 HKITSLELGAVCGKPFPVAALLVLDEGLSNI 99
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 70.9 bits (166), Expect = 6e-12
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +3
Query: 81 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVH 260
S L ++K+GK G K+ +K ++ K K+VI+A K +I +YA L+ V+
Sbjct: 10 SFEGELKSLLKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAKLSNIPVY 69
Query: 261 HYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
Y G+ +LGT CGK + + T++I D GDS I
Sbjct: 70 EYKGSGWDLGTLCGKPFMISTISIIDEGDSKI 101
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 68.5 bits (160), Expect = 3e-11
Identities = 31/94 (32%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +3
Query: 78 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA-KTG 254
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P ++ +EYY++LA
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTKRKLLEYYSVLAGGLP 68
Query: 255 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ +S NN ELG+ + +R+ ++I D G++++
Sbjct: 69 IIFHSANNEELGSITERGHRLGCISIIDQGEAEL 102
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 68.5 bits (160), Expect = 3e-11
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = +3
Query: 87 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGV--H 260
N+ L +K+GK LG +T ++ +G AKLV++A N P +E Y L K GV +
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP----AEFSGY-LSGKDGVKTY 58
Query: 261 HYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
Y G+ ++LG ACGK + V LAI + GDSDI
Sbjct: 59 TYEGSGVQLGRACGKPFIVSALAIEESGDSDI 90
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 66.9 bits (156), Expect = 1e-10
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
++ L V+++GK +G KQ +K ++G AKLVI+A N P K +I+ A ++
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYE 60
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+ G +++LG CGK Y V + + +PGDSDI
Sbjct: 61 FPGMSVDLGPICGKPYVVSAVTVLEPGDSDI 91
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 66.1 bits (154), Expect = 2e-10
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P +I+ Y +
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKIKSY----DVKILV 59
Query: 264 YSGNNIELGTACGKYYRVCTLAITD 338
Y+G N+ELG CGK + V +AIT+
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAITE 84
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 62.9 bits (146), Expect = 2e-09
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +3
Query: 81 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVH 260
+++ L +K+GK +G +T+ G AK+V++A N P K +++ V
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQE----TNVPVL 66
Query: 261 HYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
Y G ++ELG CGK + + +AI D G+SDI
Sbjct: 67 EYEGTSVELGPVCGKPFTIAAMAILDAGESDI 98
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 58.0 bits (134), Expect = 4e-08
Identities = 31/90 (34%), Positives = 51/90 (56%)
Frame = +3
Query: 87 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHY 266
N L MK+G+ LG K + + KA+LVIIA+NAP ++ + A ++ +
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAPAQIRN---FLAANENVPLYEF 60
Query: 267 SGNNIELGTACGKYYRVCTLAITDPGDSDI 356
G++ +LG CG+ + + LAI + G+SDI
Sbjct: 61 DGSSRQLGKECGRDHMISVLAIVNAGESDI 90
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/91 (32%), Positives = 48/91 (52%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
++ +L + +G G +QTL +G A+LV++A N P ++ A + VH
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCPSDYIDDLR--ARHPEVTVHQ 60
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
N ELG ACGK + + T+ + D GDSD+
Sbjct: 61 APVVNRELGVACGKPFSISTICVLDAGDSDL 91
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 53.6 bits (123), Expect = 1e-06
Identities = 30/92 (32%), Positives = 51/92 (55%)
Frame = +3
Query: 81 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVH 260
+I+ L +++GK LG +L+ +G AKL+I A + P + ++ + V+
Sbjct: 3 NIDRALRSSIRTGKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVY 58
Query: 261 HYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
Y + +LG ACGK + V LA+ +PGDS+I
Sbjct: 59 AYQSSGRDLGAACGKPFPVAALAVIEPGDSEI 90
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 117 GKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 296
GK +G +TLK L+ G+ V++A+N P K +IEYYA L+ V N ELG A
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVPDYIKEDIEYYAKLSNIPVIQVDLFNDELGAA 72
Query: 297 CGKYYRVCTLAI 332
K ++V + I
Sbjct: 73 LKKRFKVSVVGI 84
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 49.2 bits (112), Expect = 2e-05
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +3
Query: 273 NNIELGTACGKYYRVCTLAITDPGDSDI 356
+N++LGTACGKY++V L+I DPGDSDI
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDI 41
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 48.0 bits (109), Expect = 5e-05
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = +3
Query: 105 VMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGNNIE 284
+ K G K+T+K L K +IIA N K I +Y LL K +SGN+ E
Sbjct: 24 IKKKNNLVKGKKETIKNLISNKISFLIIASNCLIDTKLHIFHYCLLYKVKFCFFSGNSKE 83
Query: 285 LGTACGKYYRVCTLAI 332
LG C ++ C L I
Sbjct: 84 LGQLCDLKHKACILGI 99
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 45.2 bits (102), Expect = 3e-04
Identities = 32/91 (35%), Positives = 45/91 (49%)
Frame = +3
Query: 72 TIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKT 251
+I+ I + L L M++GK G + +++G KLVI+A +A I K
Sbjct: 2 SIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYKV 61
Query: 252 GVHHYSGNNIELGTACGKYYRVCTLAITDPG 344
+ GN ELG A GK RV + ITDPG
Sbjct: 62 PFRKF-GNRNELGIALGKGERV-NVGITDPG 90
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 44.0 bits (99), Expect = 8e-04
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +3
Query: 111 KSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 284
+SGK G +T K + +G+AKLVIIA + P + + + LL K + Y +
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP--EEIVAHLPLLCDEKKIPYVYVSSKKA 85
Query: 285 LGTACGKYYRVCTLAITDPGDS 350
LG ACG + AI +PG++
Sbjct: 86 LGEACGLQVATASAAILEPGEA 107
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = +3
Query: 60 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYAL 239
K T + + S L L K+G G T K++++GKA +VI+A +A K
Sbjct: 8 KAAATKKRVMSLLGLATKAGYVASGEFSTEKSVKEGKACVVIVAEDASENTKKMFRNMCT 67
Query: 240 LAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 344
++ + G +LG A GK +R +L+I D G
Sbjct: 68 FYDVPIYIF-GEKTDLGHAIGKEFR-ASLSINDQG 100
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 41.1 bits (92), Expect = 0.005
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +3
Query: 78 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIE----YYALLA 245
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P +I+ YY +
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGPNLTKKIQDKSHYYQVEI 63
Query: 246 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 344
T + +EL A GK +V LA+TD G
Sbjct: 64 VTVF-----STLELSIAVGKSRKV--LAVTDAG 89
>UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 93
Score = 40.7 bits (91), Expect = 0.007
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +3
Query: 108 MKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 287
MK+GK G T + GKAK VI+A +A K + K Y G+ L
Sbjct: 1 MKAGKCVSGETMTESETKSGKAKFVIVAGDASENTKKKFGDMCKFYKVPFCFY-GDKDTL 59
Query: 288 GTACGKYYRVCTLAITDPGDSD 353
G A GK +R +LAI D G +D
Sbjct: 60 GHAMGKEFR-ASLAILDEGFAD 80
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 40.3 bits (90), Expect = 0.010
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTG 254
+ +I S L L ++GK GY+ + LR K +LV++AR+ P K+ I + +
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSPGLKTRILRFCREYRRQ 60
Query: 255 VHHYSGNNIELGTACGK 305
Y N ELG A GK
Sbjct: 61 GLLYGYKN-ELGAALGK 76
>UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 101
Score = 40.3 bits (90), Expect = 0.010
Identities = 28/92 (30%), Positives = 42/92 (45%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTG 254
+ + S + L ++GK G K ++ KAK+VI++ + K E K
Sbjct: 1 MNKVFSMIGLATRAGKTVAGEFSVEKAVKDNKAKVVIVSTESSDNTKKLFENKCKFYKIP 60
Query: 255 VHHYSGNNIELGTACGKYYRVCTLAITDPGDS 350
V Y G ELG A G R ++A+ DPG S
Sbjct: 61 VFIY-GTKAELGMATGNKER-ASIAVLDPGFS 90
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.5 bits (88), Expect = 0.017
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 63 QKKTIESINSRLALVMKSGKYCLGYKQTLK 152
+++ +IN++L LVMKSGKY LGYK LK
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 39.1 bits (87), Expect = 0.022
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +3
Query: 129 LGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACG 302
+G KQTLK LR GKA VIIA +A K + A A V + + +ELG ACG
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDADEHVKQALLDAAKQANVPVVNVP-SKLELGKACG 83
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 37.5 bits (83), Expect = 0.067
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGN 275
L L M++GK G + TLK +R KAK V +A++A + +I+ + V +
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIKDKSSYYNVPVSELF-S 69
Query: 276 NIELGTACGKYYRVCTLAITDPG 344
EL A G+ V + +TD G
Sbjct: 70 QFELSQAIGRPRMV--IGVTDAG 90
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 37.5 bits (83), Expect = 0.067
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 AMITNLAFPCLSVFKVCL*PKQYLPDFITRARRELIDSMVFF--CFFA 53
A+ TNL P VF V L P Y PD +T REL+ S FF CF A
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCFGA 161
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 37.1 bits (82), Expect = 0.089
Identities = 28/87 (32%), Positives = 40/87 (45%)
Frame = +3
Query: 84 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 263
I S L L K+ K GY+ + L+ GKA+LVI+A +A K + K +
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDASQNTKKKFIDACNYRKVDIRI 65
Query: 264 YSGNNIELGTACGKYYRVCTLAITDPG 344
+ G LG GK R +A+ D G
Sbjct: 66 F-GKKELLGKFIGKDIR-SVIAVLDRG 90
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 35.9 bits (79), Expect = 0.21
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGN 275
L+ + ++ +G KQTLK L++GKA V IA +A ++ AL + V + +
Sbjct: 3 LSEIKETKNRTVGTKQTLKALQKGKAIKVFIALDAE--KRVTDPVVALCKEKNVPVETVD 60
Query: 276 NI-ELGTACGKYYRVCTLAITDPG 344
+ ELG +CG AI DPG
Sbjct: 61 TMAELGKSCGIAVGCACAAIIDPG 84
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 35.5 bits (78), Expect = 0.27
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA--KTGVHHYS 269
L++ ++GK G +T K + +G AKLV+IA + P + + LL K + Y
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDP--PEVVAHLPLLCEEKKVPYVYV 95
Query: 270 GNNIELGTACGKYYRVCTLAITDPGDS 350
+ +LG A G + +PG +
Sbjct: 96 PSKEKLGKAAGINVSAAAAVVIEPGQA 122
>UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11;
Bacillus|Rep: Acetyl-CoA acetyltransferase - Bacillus
anthracis
Length = 363
Score = 34.3 bits (75), Expect = 0.63
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 126 CLGYKQTLKTLRQGKAKLVIIARNA--PPLRKSEIEYYALLAKTGVHHYSGNNIELGTAC 299
CL YK+TL+ L +G I++ N K E+ Y ++ +T + G +C
Sbjct: 157 CLSYKRTLQALAKGYIHEEILSFNGLLDESIKPEMNYERIIKRTKPAFLHNGTVTAGNSC 216
Query: 300 GKYYRVCTLAITDPGDS 350
G C + + + G +
Sbjct: 217 GVNDGACAVLVMEEGQA 233
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 34.3 bits (75), Expect = 0.63
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 36 AIIMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNA--PPL 209
A ++ K I ++ L L++ +G Y + Y++T+K LR K + + +NA PL
Sbjct: 174 ASVLTLTKGAVVKIVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPL 233
Query: 210 RKSEI 224
K I
Sbjct: 234 LKGAI 238
>UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L7Ae -
Picrophilus torridus
Length = 127
Score = 34.3 bits (75), Expect = 0.63
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +3
Query: 111 KSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYY--ALLAKTGVHH-YSGNNI 281
K+GK G + +K++ +G++KLV+IA + P +E+ YY L + V + Y
Sbjct: 26 KTGKVRKGTNEVVKSIERGESKLVVIAEDVSP---AEVVYYLPTLCEERKVPYVYVKKKS 82
Query: 282 ELGTACGKYYRVCTLAITDPGDSD 353
+LG G +++I D G +D
Sbjct: 83 DLGLKVG-IASAASVSIVDYGKND 105
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 33.9 bits (74), Expect = 0.83
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +3
Query: 66 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA 245
K E + S L L ++GK G TL L++GK L++IA +A K + +
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFR 61
Query: 246 KTGVHHYSGNNIELGTACGK 305
+S E+G A GK
Sbjct: 62 NIPYLFFSTKE-EIGFAIGK 80
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 33.9 bits (74), Expect = 0.83
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRK 215
+E I S L L ++GK G Q L++GK L+I+A +AP K
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAPGTHK 48
>UniRef50_Q22CV0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 728
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2
Query: 134 LQTNFEDTQTRES*VGDHRQECASSEEVGDRILCSPSQNRCPPLQWKQY*ARYCLRKILQ 313
L+ F+++QT + + SEE GD+IL S QN+C + Q+ ++C +K L+
Sbjct: 9 LEEEFQNSQTNATISISQQSSKPISEEEGDKILQS-LQNQCAEYRTSQFLWQFCYKKYLR 67
>UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3;
Lactobacillus|Rep: Ribosomal protein HS6-type -
Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC
BAA-365)
Length = 94
Score = 33.1 bits (72), Expect = 1.5
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGN 275
L L ++GK G L L++GK K +IIA + + +IE T +
Sbjct: 2 LGLATRAGKTVSGTDIVLAKLKKGKLKCIIIANDLAENSRGKIEAAVKAQPTPLVDVF-T 60
Query: 276 NIELGTACGKYYRVCTLAITDPG 344
EL A GK +V LA+TD G
Sbjct: 61 EAELSQAVGKKRKV--LALTDRG 81
>UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Ferrous iron
transport protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 717
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 129 LGYKQTLKTLRQGK-AKLVIIARNAPPLRKSEIEYYALLAKTG-VHHYSGNNIELGTACG 302
+G+K KTL++GK KLV+ P + KS + + L KT V ++ G +EL A
Sbjct: 5 IGHKSGTKTLQKGKDCKLVVALVGNPNVGKSTL-FNTLTGKTAHVANWPGVTVELEAAVS 63
Query: 303 KY 308
+Y
Sbjct: 64 RY 65
>UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_32750_32382 - Giardia lamblia
ATCC 50803
Length = 122
Score = 32.7 bits (71), Expect = 1.9
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +3
Query: 132 GYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLA--KTGVHH-YSGNNIELGTAC 299
G + LK + +GKA+LVIIA +A P+ EI + LA GV + + G+ LG AC
Sbjct: 35 GANEALKQVNRGKAELVIIAADADPI---EIVLHLPLACEDKGVPYVFIGSKNALGRAC 90
>UniRef50_Q4N2T6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 965
Score = 32.7 bits (71), Expect = 1.9
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 257 DTCFG*ESIIFYLRLPQRRRIPGDDHQLSFPLSECLQSLFVAQAVFARLH---NQSQTGI 87
D +G ES+ +R P+R R+P H S +S+ +F+A +R H ++S T
Sbjct: 579 DWPYGHESVTRSVRYPKRSRLPPSQHWASNVISDGTSVVFLAGVSKSRKHKHRDRSSTES 638
Query: 86 NRLDGLF 66
N G+F
Sbjct: 639 NIAGGIF 645
>UniRef50_P55768 Cluster: Probable ribosomal protein in infB
5'region; n=2; Enterococcus faecium|Rep: Probable
ribosomal protein in infB 5'region - Enterococcus
faecium (Streptococcus faecium)
Length = 103
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 96 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIE 227
+ L M++GK G + T+ +R KAK+V +A +A K +++
Sbjct: 13 IGLAMRAGKLITGEELTIADIRNEKAKIVFVANDASENTKKKVK 56
>UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Alkaliphilus metalliredigens QYMF|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Alkaliphilus
metalliredigens QYMF
Length = 103
Score = 32.3 bits (70), Expect = 2.5
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 78 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAR----NAPPLRKSEIEYYALLA 245
E + L L MKSG G + K L++GK L+++A+ N L + YY +
Sbjct: 3 ERTKNLLGLGMKSGSLISGEENCKKELKKGKVYLILLAKDSSDNTTKLFNDKCTYYQVPI 62
Query: 246 KT-GVHHYSGNNI 281
+T G GN I
Sbjct: 63 RTVGTKEILGNCI 75
>UniRef50_O70789 Cluster: Pns10-2; n=1; Oat sterile dwarf virus|Rep:
Pns10-2 - Oat sterile dwarf virus
Length = 194
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 154 VFKVCL*PKQYLPDFI--TRARRELIDSMVFFCFFAATIMIAVFYSDPLV 11
VFK+C YL I R R LI ++ FCFF ++ +FY D ++
Sbjct: 90 VFKLCY----YLLGLIICNRFSRLLISTVFSFCFFVLIFLLIIFYHDSII 135
>UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein;
n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Ribosomal protein L7ae family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 104
Score = 31.5 bits (68), Expect = 4.4
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTG 254
+ + L L K+ K +G + L ++GK + VI+A N +K +IE+ A T
Sbjct: 1 MNKVEGILGLAYKAKKLLVGETEVLLGFKRGKIEGVILAVNTSEKQKKKIEFLAKEQGTL 60
Query: 255 VHHYSGNNIELG 290
V ++ G E+G
Sbjct: 61 VVNW-GTKEEIG 71
>UniRef50_A6CL35 Cluster: Putative uncharacterized protein; n=2;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 128
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 57 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSE--IEY 230
KK K ++S L + K+ YK+ LK +++ KAKL R ++K+E ++Y
Sbjct: 48 KKAKAKLKSYKRFLKGIKKAKAKLKSYKRFLKDIKKAKAKLKSYKRFLKDIKKAEAKLKY 107
Query: 231 YALLAK 248
Y K
Sbjct: 108 YKRFLK 113
>UniRef50_Q5NA63 Cluster: Putative uncharacterized protein
OSJNBa0010K01.14; n=2; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0010K01.14 - Oryza sativa
subsp. japonica (Rice)
Length = 642
Score = 31.5 bits (68), Expect = 4.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 279 YCFHCSGGHLFWLGEHNILSPTSSEEA 199
+C HC H W G H+I+ P + + A
Sbjct: 440 FCSHCCSSHHLWPGHHHIVVPVTVDAA 466
>UniRef50_A6R7Z2 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 796
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 200 RIPGDDHQLSFPLSECLQSLFVAQAVFARLHNQSQTGINRL 78
+I D +++FPLS CLQ L ++ ++LH + I +L
Sbjct: 89 KIDDGDLRITFPLSRCLQVLKEKYSIISKLHRERFEQIKKL 129
>UniRef50_Q67JT7 Cluster: Ribosomal protein L7AE family; n=3;
Firmicutes|Rep: Ribosomal protein L7AE family -
Symbiobacterium thermophilum
Length = 83
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNA 200
+ K +G KQT+K + +G+A++V +AR+A
Sbjct: 9 ASKKTIGTKQTVKAIAKGQARVVFVARDA 37
>UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Ribosomal
protein HS6-type - Pediococcus pentosaceus (strain ATCC
25745 / 183-1w)
Length = 100
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 78 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
E+I+ L L+ +SG G + L ++R KAK V++ + K +I
Sbjct: 4 ENISKYLGLMRRSGNLVTGQELVLSSIRSQKAKFVLVTEDIGESSKKKI 52
>UniRef50_A4B625 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 125
Score = 31.1 bits (67), Expect = 5.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 279 YCFHCSGGHLFWLGEHNILSPTSSEEAHSW 190
+C HC G H W+G H+I + H++
Sbjct: 74 HCGHCHGSHAQWVGHHSINNLNEVASGHNF 103
>UniRef50_A0RUR4 Cluster: Ribosomal protein L30E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L30E - Cenarchaeum
symbiosum
Length = 101
Score = 31.1 bits (67), Expect = 5.9
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 108 MKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 287
+K + +G KQ ++ +K+++++R EI A A + G+++ L
Sbjct: 13 VKEDRCTIGAKQVAGAIKG--SKMIVLSRLRQGNDTGEITRGAEEAGVPTVSFEGSSVAL 70
Query: 288 GTACGKYYRVCTLAI 332
G CG YRV ++I
Sbjct: 71 GRLCGLQYRVSAISI 85
>UniRef50_UPI0000D9F481 Cluster: PREDICTED: similar to eukaryotic
translation termination factor 1; n=2; Macaca
mulatta|Rep: PREDICTED: similar to eukaryotic
translation termination factor 1 - Macaca mulatta
Length = 136
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 117 GKYCLGYKQTLKTLRQGKAKLVIIARN 197
GKYC G + +LK L+ G + +I+ N
Sbjct: 2 GKYCFGIEDSLKALKMGAVETLIVFEN 28
>UniRef50_A1KBS6 Cluster: Sensor protein; n=1; Azoarcus sp.
BH72|Rep: Sensor protein - Azoarcus sp. (strain BH72)
Length = 612
Score = 30.7 bits (66), Expect = 7.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 197 IPGDDHQLSFPLSECLQSLFVAQAVFARLHNQSQTGINRLDGLFLFLCCNH 45
+ G H+L+ PL L +L A+ A L Q TG+ + D L FL +H
Sbjct: 369 VAGVAHELNTPLGSALMALSTAREGVATLEAQIGTGLRKSD-LTSFLATSH 418
>UniRef50_A7DR42 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep:
Ribosomal protein L7Ae/L30e/S12e/Gadd45 - Candidatus
Nitrosopumilus maritimus SCM1
Length = 128
Score = 30.7 bits (66), Expect = 7.7
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 75 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKT- 251
+ I + + SGK G + K + +G +KL++IA + P + + +L +
Sbjct: 16 VNPILEAVRVASTSGKVKKGTNEATKAIERGTSKLIVIAEDVEP--PEVVAHLPILCEEQ 73
Query: 252 -GVHHYSGNNIELGTACGKYYRVCTLAITDPGDS 350
+ + ELG + G AI D GD+
Sbjct: 74 GAAFAFVPSKQELGKSLGIDITSAAAAILDAGDA 107
>UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein H6-type -
Cenarchaeum symbiosum
Length = 126
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 66 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPP 206
K + I L +SGK G + K + +G +KLV+IA + P
Sbjct: 13 KDLVNPILEALRAATQSGKVKKGTNEATKAIERGTSKLVVIAEDVEP 59
>UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK686.1 - Caenorhabditis elegans
Length = 44
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 102 LVMKSGKYCLGYKQTLKTLRQGKAKLVI 185
+VMK+G+Y L Y+Q LK+L AKLVI
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVI 27
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,875,817
Number of Sequences: 1657284
Number of extensions: 7240348
Number of successful extensions: 17710
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 17388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17694
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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