Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J02
(358 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 193 1e-49
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 193 1e-49
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 193 1e-49
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 193 1e-49
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 193 1e-49
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 34 0.15
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 34 0.15
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 34 0.15
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 34 0.15
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 34 0.15
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 34 0.15
EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII prot... 29 3.2
EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII prot... 29 3.2
BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein. 28 7.4
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein. 28 7.4
BC028713-1|AAH28713.1| 341|Homo sapiens PDLIM1 interacting kina... 28 7.4
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 28 7.4
AL834290-1|CAD38964.1| 208|Homo sapiens hypothetical protein pr... 28 7.4
AL391650-6|CAI17135.1| 341|Homo sapiens PDLIM1 interacting kina... 28 7.4
AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens ... 28 7.4
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 28 7.4
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 28 7.4
BC128152-1|AAI28153.1| 446|Homo sapiens AGBL1 protein protein. 28 9.8
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 193 bits (471), Expect = 1e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 193 bits (471), Expect = 1e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 193 bits (471), Expect = 1e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 193 bits (471), Expect = 1e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 193 bits (471), Expect = 1e-49
Identities = 91/104 (87%), Positives = 96/104 (92%)
Frame = +3
Query: 45 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 224
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 225 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDI
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDI 104
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 212
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 26 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 127
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
>EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 26 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 127
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>BC028713-1|AAH28713.1| 341|Homo sapiens PDLIM1 interacting kinase
1 like protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/76 (22%), Positives = 40/76 (52%)
Frame = +2
Query: 104 GYEVWQILLGLQTNFEDTQTRES*VGDHRQECASSEEVGDRILCSPSQNRCPPLQWKQY* 283
G +W +L + F DT+T++ +G + ++ VG+ +L +P P++ K
Sbjct: 244 GIIIWAMLERI--TFIDTETKKELLGSYVKQGTEIVPVGEALLENPKMELLIPVKKKSMN 301
Query: 284 ARYCLRKILQSMYSSN 331
R ++++++ M ++N
Sbjct: 302 GR--MKQLIKEMLAAN 315
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>AL834290-1|CAD38964.1| 208|Homo sapiens hypothetical protein
protein.
Length = 208
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/76 (22%), Positives = 40/76 (52%)
Frame = +2
Query: 104 GYEVWQILLGLQTNFEDTQTRES*VGDHRQECASSEEVGDRILCSPSQNRCPPLQWKQY* 283
G +W +L + F DT+T++ +G + ++ VG+ +L +P P++ K
Sbjct: 111 GIIIWAMLERI--TFIDTETKKELLGSYVKQGTEIVPVGEALLENPKMELLIPVKKKSMN 168
Query: 284 ARYCLRKILQSMYSSN 331
R ++++++ M ++N
Sbjct: 169 GR--MKQLIKEMLAAN 182
>AL391650-6|CAI17135.1| 341|Homo sapiens PDLIM1 interacting kinase
1 like protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/76 (22%), Positives = 40/76 (52%)
Frame = +2
Query: 104 GYEVWQILLGLQTNFEDTQTRES*VGDHRQECASSEEVGDRILCSPSQNRCPPLQWKQY* 283
G +W +L + F DT+T++ +G + ++ VG+ +L +P P++ K
Sbjct: 244 GIIIWAMLERI--TFIDTETKKELLGSYVKQGTEIVPVGEALLENPKMELLIPVKKKSMN 301
Query: 284 ARYCLRKILQSMYSSN 331
R ++++++ M ++N
Sbjct: 302 GR--MKQLIKEMLAAN 315
>AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ39977 fis, clone SPLEN2029295, moderately
similar to ATP-binding cassette, sub-family A member 8.
).
Length = 815
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 312 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 342
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 124 YLPDFITRARRELIDSMVFFCFFAATIMIAV 32
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>BC128152-1|AAI28153.1| 446|Homo sapiens AGBL1 protein protein.
Length = 446
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 258 HHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 356
+HY + G A GK Y T A+T P D+
Sbjct: 346 NHYRQSTAVAGRASGKCYYTLTFAVTFPHSEDV 378
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,605,145
Number of Sequences: 237096
Number of extensions: 1139399
Number of successful extensions: 2111
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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