Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J01
         (342 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   168   4e-44
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     25   1.0  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   1.8  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     22   5.5  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    22   7.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    21   9.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  168 bits (409), Expect = 4e-44
 Identities = 82/105 (78%), Positives = 87/105 (82%)
 Frame = +2

Query: 26  MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
           MGRVRT             YYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM R
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKR 60

Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
           L HSQVRGISIKLQEEERERRDNYVP+VSALEQDIIEVD +TK+M
Sbjct: 61  LRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEM 105


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 227 GISIKLQEEERERRDNYVPEVSALE-QDIIEVDSDTKDM 340
           G + +L+EEE + +  + PE+   E  + ++V ++ K+M
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNM 125


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 249 KRSVKGVTIMSQKYLL*NRISLKSI 323
           K  +K VT+M  K  + N ISLK++
Sbjct: 214 KMKMKSVTVMFPKMHISNSISLKNV 238


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 70  NLRRFFYGLSPN 35
           N ++FFY L+PN
Sbjct: 129 NFKKFFYTLNPN 140


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 221 VRGISI--KLQEEERERRDNYVPEV 289
           +R +SI  KLQ   ++RRD YV  V
Sbjct: 168 IRSLSICAKLQRIPKDRRDLYVQGV 192


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 1   ARGLHRRNHGSC*D*DHKKSVEDYNRKI 84
           ARGL  +N     + D  KS++DY  +I
Sbjct: 484 ARGLDIKNVNHVVNYDLPKSIDDYVHRI 511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,146
Number of Sequences: 2352
Number of extensions: 6625
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)