Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J01
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 151 7e-37
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 151 7e-37
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 151 7e-37
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 151 7e-37
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 127 8e-30
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 31 0.94
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 31 0.94
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 31 0.94
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 31 0.94
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 30 2.2
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 30 2.2
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 30 2.2
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 30 2.2
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 30 2.2
BC115394-1|AAI15395.1| 1076|Homo sapiens glutamate receptor inte... 28 8.7
BC115393-1|AAI15394.1| 1076|Homo sapiens glutamate receptor inte... 28 8.7
AJ133439-1|CAB39895.1| 849|Homo sapiens GRIP1 protein protein. 28 8.7
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 151 bits (365), Expect = 7e-37
Identities = 74/105 (70%), Positives = 81/105 (77%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEM 105
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 127 bits (307), Expect = 8e-30
Identities = 63/105 (60%), Positives = 73/105 (69%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MG V T YY L DF TNK +C+EIAIIP+K L NK AG+ THLM +
Sbjct: 1 MGHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQ 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+ VRGISIKLQEE RERRDNYVPE+SAL+Q+IIEVD DTK+M
Sbjct: 61 IQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEM 105
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 203 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 203 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 203 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 31.1 bits (67), Expect = 0.94
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +2
Query: 203 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 245 QEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+EEE E + Y P LEQ++I + + +++
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEEL 214
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 245 QEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+EEE E + Y P LEQ++I + + +++
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEEL 214
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 245 QEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+EEE E + Y P LEQ++I + + +++
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEEL 265
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 245 QEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+EEE E + Y P LEQ++I + + +++
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEEL 339
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 245 QEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
+EEE E + Y P LEQ++I + + +++
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEEL 339
>BC115394-1|AAI15395.1| 1076|Homo sapiens glutamate receptor
interacting protein 1 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 87 TLGLLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPI**YV---SYTPRCEESLLSFKKRS 257
T ++LT+ P+ G+ +L S+FAT+ L SPP+ Y+ S RC + + +
Sbjct: 418 TTEVVLTADPVTGFGIQLQG---SVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMA 474
Query: 258 VKGV 269
+ G+
Sbjct: 475 INGI 478
>BC115393-1|AAI15394.1| 1076|Homo sapiens glutamate receptor
interacting protein 1 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 87 TLGLLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPI**YV---SYTPRCEESLLSFKKRS 257
T ++LT+ P+ G+ +L S+FAT+ L SPP+ Y+ S RC + + +
Sbjct: 418 TTEVVLTADPVTGFGIQLQG---SVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMA 474
Query: 258 VKGV 269
+ G+
Sbjct: 475 INGI 478
>AJ133439-1|CAB39895.1| 849|Homo sapiens GRIP1 protein protein.
Length = 849
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 87 TLGLLLTSIPIKGYVRKLLSFLLSLFATKLLGSPPI**YV---SYTPRCEESLLSFKKRS 257
T ++LT+ P+ G+ +L S+FAT+ L SPP+ Y+ S RC + + +
Sbjct: 206 TTEVVLTADPVTGFGIQLQG---SVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMA 262
Query: 258 VKGV 269
+ G+
Sbjct: 263 INGI 266
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,297,074
Number of Sequences: 237096
Number of extensions: 950147
Number of successful extensions: 1957
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1957
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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