Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_J01
(342 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 169 1e-42
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 169 1e-42
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 169 1e-42
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 169 1e-42
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P... 28 2.8
DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein. 27 4.8
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA... 27 4.8
AY071228-1|AAL48850.1| 326|Drosophila melanogaster RE26822p pro... 27 8.4
AE014297-2781|AAG22161.1| 355|Drosophila melanogaster CG5085-PA... 27 8.4
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 169 bits (410), Expect = 1e-42
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+M
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEM 105
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 169 bits (410), Expect = 1e-42
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+M
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEM 105
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 169 bits (410), Expect = 1e-42
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+M
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEM 105
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 169 bits (410), Expect = 1e-42
Identities = 83/105 (79%), Positives = 87/105 (82%)
Frame = +2
Query: 26 MGRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMIR 205
MGRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM R
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGR 60
Query: 206 LIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 340
L HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+M
Sbjct: 61 LRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEM 105
>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
isoform B protein.
Length = 1109
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 292 RYFWDIIVTPFTLLFLKLNRDSSHLGVYETYHQMGGE 182
RY ++ TP +L FL L+ D+ HL Y + + GE
Sbjct: 17 RYLTLLMNTPLSLSFLCLSADAQHLIAYISQRGLHGE 53
>DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.
Length = 2765
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 254 ERERRDNYVPEVSALEQDIIEVDSDTKD 337
ER R +P++S L+QD ++V TKD
Sbjct: 1924 ERVRDGLNLPDISHLKQDSLDVSESTKD 1951
>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
protein.
Length = 2958
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 254 ERERRDNYVPEVSALEQDIIEVDSDTKD 337
ER R +P++S L+QD ++V TKD
Sbjct: 2117 ERVRDGLNLPDISHLKQDSLDVSESTKD 2144
>AY071228-1|AAL48850.1| 326|Drosophila melanogaster RE26822p
protein.
Length = 326
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 97 KPSVVFFDYNLRRFFYGLSPNTTHDC 20
KP +VFF NL + FY DC
Sbjct: 229 KPDIVFFGENLPKRFYSSPEEDFQDC 254
>AE014297-2781|AAG22161.1| 355|Drosophila melanogaster CG5085-PA
protein.
Length = 355
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 97 KPSVVFFDYNLRRFFYGLSPNTTHDC 20
KP +VFF NL + FY DC
Sbjct: 198 KPDIVFFGENLPKRFYSSPEEDFQDC 223
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,659,939
Number of Sequences: 53049
Number of extensions: 269781
Number of successful extensions: 790
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -