Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_J01
         (342 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   0.77 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          20   7.2  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 23/87 (26%), Positives = 34/87 (39%)
 Frame = -3

Query: 283 WDIIVTPFTLLFLKLNRDSSHLGVYETYHQMGGEPSNFVAKRLSRNDSNFLTYPFIGIEV 104
           W I  T F L+ + L  D+S+    ET+      PS  V  +  R         F   + 
Sbjct: 167 WSISGTVFDLINIHLFHDASNFIAMETF------PS--VYSKTRRRALEHTLDRFHNDKY 218

Query: 103 KSKPSVVFFDYNLRRFFYGLSPNTTHD 23
            + P  +F D+N R    G+    T D
Sbjct: 219 SNVPYFLFGDFNFRTDTAGVIKKLTED 245


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 115 GIEVKSKPSVVFFDYNLRRFFYGLSPNTT 29
           GI  K     V++DY    +F  LSPN T
Sbjct: 60  GIHRKKVLLSVWWDYKGIVYFELLSPNRT 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,673
Number of Sequences: 438
Number of extensions: 1832
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)