Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I22
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 214 2e-56
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 214 2e-56
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 214 2e-56
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 214 2e-56
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 3e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 119 7e-28
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 119 7e-28
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 111 2e-25
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 3e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 52 2e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 52 2e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 52 2e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 50 5e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 47 4e-06
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 47 4e-06
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 38 0.002
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 38 0.002
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.73
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.96
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.96
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 0.96
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 0.96
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 23 2.6
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 2.9
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 5.1
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 6.8
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 6.8
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 9.0
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 26 9.0
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 9.0
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 26 9.0
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 214 bits (523), Expect = 2e-56
Identities = 98/100 (98%), Positives = 99/100 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIK
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 214 bits (523), Expect = 2e-56
Identities = 98/100 (98%), Positives = 99/100 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIK
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 214 bits (523), Expect = 2e-56
Identities = 98/100 (98%), Positives = 99/100 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIK
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 214 bits (523), Expect = 2e-56
Identities = 98/100 (98%), Positives = 99/100 (99%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIK
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 3e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 285
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 286 DKLKAER 306
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 119 bits (287), Expect = 7e-28
Identities = 52/96 (54%), Positives = 70/96 (72%)
Frame = +1
Query: 115 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 294
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 295 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 402
+ ERERG+T+DI FET + ++DAPGH+DFI
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 262
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 119 bits (287), Expect = 7e-28
Identities = 52/96 (54%), Positives = 70/96 (72%)
Frame = +1
Query: 115 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 294
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 295 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 402
+ ERERG+T+DI FET + ++DAPGH+DFI
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 280
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 111 bits (267), Expect = 2e-25
Identities = 48/98 (48%), Positives = 70/98 (71%)
Frame = +1
Query: 109 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 288
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 289 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFI 402
ERE+G T+++ FET K + TI+DAPGH+ F+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/98 (32%), Positives = 46/98 (46%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
E+ RGITI+ ++ET K + ID PGH D+IK
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 127
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/98 (32%), Positives = 46/98 (46%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
E+ RGITI+ ++ET K + ID PGH D+IK
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 51.6 bits (118), Expect = 2e-07
Identities = 32/98 (32%), Positives = 46/98 (46%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
E+ RGITI+ ++ET K + ID PGH D+IK
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.4 bits (115), Expect = 5e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
RGITI A + + IID PGH DF
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDF 125
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 2e-06
Identities = 31/90 (34%), Positives = 42/90 (46%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
RGIT+ Y + +ID PGH DF
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDF 115
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 47.2 bits (107), Expect = 4e-06
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
K E++RGITI++A +E+ + D PGH DFIK
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 47.2 bits (107), Expect = 4e-06
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 291
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 292 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIK 405
K E++RGITI++A +E+ + D PGH DFIK
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 282
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 283 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 399
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 282
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 283 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDF 399
L+K E +G T+++ K + + + +ID+PGH DF
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF 123
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 112 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 288
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 289 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 112 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 288
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 289 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ E+ RGIT+ + + +ID+PGH DF
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDF 96
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.73
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 384 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 295
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 208 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 0.96
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 0.96
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 192
P K+ + + V+G+VD+GKST G L +
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTT 177
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 23.4 bits (48), Expect(2) = 2.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 253 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDF 399
GK + A ++ A GIT I + E K VT +D PGH F
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAF 217
Score = 23.0 bits (47), Expect(2) = 2.6
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 133 IVVIGHVDSGKST 171
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTII 375
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTII 375
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 277 WVLDKLKAERERGITIDIALWKFETGKYYVTII 375
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 258
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 258
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 258
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 89 LLDSLFHFTKLFLQTLTTD 33
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 89 LLDSLFHFTKLFLQTLTTD 33
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 26.2 bits (55), Expect = 9.0
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ + I + Y + IID PGH +F
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNF 214
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 158 PASPQQLVT*STNAVVSTNVPSKSS 232
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 26.2 bits (55), Expect = 9.0
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 309
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 310 RGITIDIALWKFETGKYYVTIIDAPGHRDF 399
+ + I + Y + IID PGH +F
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNF 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,207,938
Number of Sequences: 27780
Number of extensions: 178362
Number of successful extensions: 608
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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