Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I19
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.37 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   1.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   1.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   1.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   3.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   3.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 134 TRRIAHGRTETGRFFRVNSVCRILWAISAGVPSPV*LALS 253
           T+ I + + +  R  RV     ++WAISA + SP+ L L+
Sbjct: 289 TQPIKYAKHKNNR--RVWLTILLVWAISAAIGSPIVLGLN 326


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
 Frame = -1

Query: 267 CAVYRLSASYTGEGT---PAEIAHKMRQTELTRKNLPVSVRPCAILLVS--VLDTVIMRI 103
           CA YR +     E     P  I      +E  +KN   ++RP A LL S   L ++  R+
Sbjct: 256 CAEYRRNFKKMQEEKIFEPHRIPQLQEVSEFLKKNTGFTLRPAAGLLTSRDFLSSLAFRV 315

Query: 102 AH*NSLLMLLKMQLH 58
                 +  +K   H
Sbjct: 316 FQSTQYIRHIKSPYH 330


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 178 SSQFSLSHFVGNLSGRSFASVTSTQSVY 261
           ++QF L +FVGNL+    A  TS   VY
Sbjct: 108 NTQF-LRYFVGNLASGGAAGATSLCFVY 134


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 178 SSQFSLSHFVGNLSGRSFASVTSTQSVY 261
           ++QF L +FVGNL+    A  TS   VY
Sbjct: 108 NTQF-LRYFVGNLASGGAAGATSLCFVY 134


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 100 GNSHNNSVQYGNQKNCTRPNRDGQ 171
           GN  N++ Q GN++N  + N + Q
Sbjct: 497 GNKQNDNKQNGNRQNDNKRNGNRQ 520


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 142 NCTRPNRDGQVFSSQ 186
           +CTRP+R   V SSQ
Sbjct: 15  SCTRPSRGNAVPSSQ 29


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 142 NCTRPNRDGQVFSSQ 186
           +CTRP+R   V SSQ
Sbjct: 15  SCTRPSRGNAVPSSQ 29


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 164 SRFGRVQFFWFP 129
           S FG +  +WFP
Sbjct: 205 SLFGMIMMYWFP 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,540
Number of Sequences: 438
Number of extensions: 1963
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)