Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I18
         (215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   3.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   3.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   6.7  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 212 IYMIIFVT 189
           IYMIIFVT
Sbjct: 46  IYMIIFVT 53


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 213 YLYDNICDFSCCH 175
           Y YD IC  +  H
Sbjct: 501 YTYDTICQLNIVH 513


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 189 FSCCHKPSETCKYYFNL 139
           FS      E C YY NL
Sbjct: 32  FSMTQVNKEECDYYQNL 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,138
Number of Sequences: 438
Number of extensions: 610
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)