Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I14
(322 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.23
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 26 1.2
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 26 1.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 2.1
SPCC11E10.04 |||mitochondrial ATPase expression protein homolog|... 25 2.8
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 3.8
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 25 3.8
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 24 5.0
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 24 5.0
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 23 8.7
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr... 23 8.7
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 23 8.7
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 0.23
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 151 KPLNETYAGATLVYTSEYSNTPLYARDTFRKKKPR*MK 38
K L TY+G LV + Y + P+Y D RK + + K
Sbjct: 115 KDLIYTYSGLFLVAVNPYCHLPIYGDDVVRKYQSKQFK 152
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 26.2 bits (55), Expect = 1.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 226 EIGILLRDRTEKNVILKP*EKVRGIKPLNETYAGATLVYTSEYSNTPLYARDTFRKKK 53
++ L +T K V K ++V+ IK L T +TLV T + + FR+ +
Sbjct: 646 DVDSFLHPKTPKWVFNKQDQEVKEIKALTSTVTDSTLVDTQSFHPYKVVTDMIFREDR 703
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.2 bits (55), Expect = 1.2
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 272 IRVNYWNAVPYGR 234
I +NYW AVPYG+
Sbjct: 2152 ILINYWLAVPYGQ 2164
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.4 bits (53), Expect = 2.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 136 TYAGATLVYTSEYSNTPLYARDTFRKKKPR 47
TY+G LV + Y P+Y +D + K +
Sbjct: 108 TYSGLFLVAVNPYCGLPIYTKDIIQLYKDK 137
>SPCC11E10.04 |||mitochondrial ATPase expression protein
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 443
Score = 25.0 bits (52), Expect = 2.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 320 HTLKIIINKYLRNKIDIRVNYWNAVPYGRLGGDR 219
H L+ I+ + +I V+Y+NA+ G +GG+R
Sbjct: 148 HILEYIVARVKEKRIRPSVDYFNAI-LGVIGGNR 180
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 111 YTSVAPAYVSFNGFIPRTFSYG 176
Y PA S N IPRT YG
Sbjct: 378 YNQDMPAIWSLNAQIPRTLQYG 399
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 3.8
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 52 VFFFGTYPSRKAGYYCTRLCIRVSRLRTSHLTVLFHGLFLTVLISHFFQFGRAAKSLS 225
+F G P RK Y + C+ + HL V F + L S +F++ + ++LS
Sbjct: 147 LFIGGLLPDRKLKYMKQQSCLGSKNVTDKHLMV---WAFESFLKSFYFKYIQIIEALS 201
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 24.2 bits (50), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 139 HLTVLFHGLFLTVLISHFF 195
+ T LF GL VLIS+FF
Sbjct: 497 NFTGLFSGLIYIVLISYFF 515
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 24.2 bits (50), Expect = 5.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 127 GATLVYTSEYSNTPLY 80
G+ +YTSE TPLY
Sbjct: 19 GSVTIYTSEVIGTPLY 34
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 23.4 bits (48), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 7 GFNHEPRYTRISFNAVFF 60
GFN++P+ S NA+FF
Sbjct: 1176 GFNNQPQTNASSGNAMFF 1193
>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1471
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 136 TYAGATLVYTSEYSNTPLYARDTFRK 59
TY+G LV + Y N P + D K
Sbjct: 96 TYSGIVLVSINPYQNLPEFYNDNLIK 121
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 23.4 bits (48), Expect = 8.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 151 KPLNETYAGATLVYTSEYSNTPLYARDTFRKKKP 50
K + +AG L +S + +PLYAR F P
Sbjct: 457 KYVASVFAGNALFRSSMAAASPLYARAMFNNTGP 490
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,268,421
Number of Sequences: 5004
Number of extensions: 24440
Number of successful extensions: 69
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 88030718
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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