Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I14
         (322 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ120624-1|ABB92410.1|  513|Homo sapiens GMCL2 protein.                29   2.4  
BC112037-1|AAI12038.1|  509|Homo sapiens scavenger receptor clas...    29   2.4  
BC093732-1|AAH93732.1|  509|Homo sapiens scavenger receptor clas...    29   2.4  
BC080647-1|AAH80647.1|  509|Homo sapiens scavenger receptor clas...    29   2.4  
BC033886-1|AAH33886.1|  526|Homo sapiens GMCL1L protein protein.       29   2.4  
BC024185-1|AAH24185.1|  526|Homo sapiens GMCL1L protein protein.       29   2.4  
BC024184-1|AAH24184.1|  526|Homo sapiens GMCL1L protein protein.       29   2.4  
AB209436-1|BAD92673.1|  581|Homo sapiens Scavenger receptor clas...    29   2.4  
Z22555-1|CAA80277.1|  509|Homo sapiens CLA-1 protein.                  29   4.1  
X60435-1|CAA42962.1|  176|Homo sapiens PACAP precursor protein.        28   7.2  
S83513-1|AAB21470.1|  176|Homo sapiens pituitary adenylate cycla...    28   7.2  
BC101803-1|AAI01804.1|  176|Homo sapiens adenylate cyclase activ...    28   7.2  
BC093837-1|AAH93837.1|  176|Homo sapiens adenylate cyclase activ...    28   7.2  

>DQ120624-1|ABB92410.1|  513|Homo sapiens GMCL2 protein.
          Length = 513

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 209 QQNPYLPQACRKELRSNSSLVYRFYFLN 292
           +Q P L    RK+LRS S  +Y+  FLN
Sbjct: 77  KQQPLLNTPARKKLRSTSKYIYQTLFLN 104


>BC112037-1|AAI12038.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 120 VAPAYVSFNGFIPRTFSYGFNITFFSVRSRSKIPISPKPAVRNCVPIVHSYIDFIS*ILI 299
           + P+ +SFN +      +  ++ FF V + S+I    KP VR   P V+      S I  
Sbjct: 46  IDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITF 105

Query: 300 NN 305
           NN
Sbjct: 106 NN 107


>BC093732-1|AAH93732.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 120 VAPAYVSFNGFIPRTFSYGFNITFFSVRSRSKIPISPKPAVRNCVPIVHSYIDFIS*ILI 299
           + P+ +SFN +      +  ++ FF V + S+I    KP VR   P V+      S I  
Sbjct: 46  IDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITF 105

Query: 300 NN 305
           NN
Sbjct: 106 NN 107


>BC080647-1|AAH80647.1|  509|Homo sapiens scavenger receptor class
           B, member 1 protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 120 VAPAYVSFNGFIPRTFSYGFNITFFSVRSRSKIPISPKPAVRNCVPIVHSYIDFIS*ILI 299
           + P+ +SFN +      +  ++ FF V + S+I    KP VR   P V+      S I  
Sbjct: 46  IDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITF 105

Query: 300 NN 305
           NN
Sbjct: 106 NN 107


>BC033886-1|AAH33886.1|  526|Homo sapiens GMCL1L protein protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 209 QQNPYLPQACRKELRSNSSLVYRFYFLN 292
           +Q P L    RK+LRS S  +Y+  FLN
Sbjct: 77  KQQPLLNTPARKKLRSTSKYIYQTLFLN 104


>BC024185-1|AAH24185.1|  526|Homo sapiens GMCL1L protein protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 209 QQNPYLPQACRKELRSNSSLVYRFYFLN 292
           +Q P L    RK+LRS S  +Y+  FLN
Sbjct: 77  KQQPLLNTPARKKLRSTSKYIYQTLFLN 104


>BC024184-1|AAH24184.1|  526|Homo sapiens GMCL1L protein protein.
          Length = 526

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 209 QQNPYLPQACRKELRSNSSLVYRFYFLN 292
           +Q P L    RK+LRS S  +Y+  FLN
Sbjct: 77  KQQPLLNTPARKKLRSTSKYIYQTLFLN 104


>AB209436-1|BAD92673.1|  581|Homo sapiens Scavenger receptor class B
           member 1 variant protein.
          Length = 581

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 120 VAPAYVSFNGFIPRTFSYGFNITFFSVRSRSKIPISPKPAVRNCVPIVHSYIDFIS*ILI 299
           + P+ +SFN +      +  ++ FF V + S+I    KP VR   P V+      S I  
Sbjct: 74  IDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITF 133

Query: 300 NN 305
           NN
Sbjct: 134 NN 135


>Z22555-1|CAA80277.1|  509|Homo sapiens CLA-1 protein.
          Length = 509

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 120 VAPAYVSFNGFIPRTFSYGFNITFFSVRSRSKIPISPKPAVRNCVPIVHSYIDFIS*ILI 299
           + P+ +SFN +      +  ++ FF V + S+I    KP VR   P V+      S I  
Sbjct: 46  IDPSSLSFNMWKEIPIPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYRESRHKSNITF 105

Query: 300 NN 305
           NN
Sbjct: 106 NN 107


>X60435-1|CAA42962.1|  176|Homo sapiens PACAP precursor protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 87  GVLLYSLVYTSVAPAYVSFNGFIPRTFSYG 176
           G++++S VY+S A A + F G  P   +YG
Sbjct: 15  GIIMHSSVYSSPAAAGLRFPGIRPEEEAYG 44


>S83513-1|AAB21470.1|  176|Homo sapiens pituitary adenylate cyclase
           activating polypeptide protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 87  GVLLYSLVYTSVAPAYVSFNGFIPRTFSYG 176
           G++++S VY+S A A + F G  P   +YG
Sbjct: 15  GIIMHSSVYSSPAAAGLRFPGIRPEEEAYG 44


>BC101803-1|AAI01804.1|  176|Homo sapiens adenylate cyclase
           activating polypeptide 1 (pituitary) protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 87  GVLLYSLVYTSVAPAYVSFNGFIPRTFSYG 176
           G++++S VY+S A A + F G  P   +YG
Sbjct: 15  GIIMHSSVYSSPAAAGLRFPGIRPEEEAYG 44


>BC093837-1|AAH93837.1|  176|Homo sapiens adenylate cyclase
           activating polypeptide, precursor protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 87  GVLLYSLVYTSVAPAYVSFNGFIPRTFSYG 176
           G++++S VY+S A A + F G  P   +YG
Sbjct: 15  GIIMHSSVYSSPAAAGLRFPGIRPEEEAYG 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,235,058
Number of Sequences: 237096
Number of extensions: 772242
Number of successful extensions: 5002
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5002
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)