Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I09
(275 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 50 2e-07
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-07
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-07
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 50 2e-07
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 50 2e-07
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 50 2e-07
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 50 3e-07
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 50 3e-07
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 49 5e-07
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 49 5e-07
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 44 2e-05
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 42 5e-05
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 42 5e-05
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.088
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 31 0.12
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 31 0.12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 28 0.82
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 27 1.9
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 27 1.9
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 27 2.5
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 27 2.5
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 27 2.5
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 26 3.3
AC006662-2|AAL06035.1| 535|Caenorhabditis elegans Hypothetical ... 26 3.3
AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical ... 26 3.3
Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z81542-4|CAB04418.1| 233|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical pr... 25 7.7
Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical pr... 25 7.7
AL132847-4|CAB63373.3| 965|Caenorhabditis elegans Hypothetical ... 25 7.7
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYT 24
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLL+SYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYT 24
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 49.6 bits (113), Expect = 3e-07
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQAIKCVVVGDGAVG TCLL+SYT
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYT 24
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 48.8 bits (111), Expect = 5e-07
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQ IKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYT 24
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 48.8 bits (111), Expect = 5e-07
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3
Query: 204 MQAIKCVVVGDGAVGITCLLISYT 275
MQ IKCVVVGDGAVG TCLLISYT
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYT 24
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISYT 275
+KCVVVGDGAVG TCLLISYT
Sbjct: 1 MKCVVVGDGAVGKTCLLISYT 21
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISYT 275
IKCVVVGDG VG TC+LISYT
Sbjct: 8 IKCVVVGDGTVGKTCMLISYT 28
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 42.3 bits (95), Expect = 5e-05
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISYT 275
IKCVVVGDG VG TC+LISYT
Sbjct: 8 IKCVVVGDGTVGKTCMLISYT 28
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.088
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 207 QAIKCVVVGDGAVGITCLLISYT 275
+ +KC+ VG+ AVG T +++SYT
Sbjct: 8 KCLKCIFVGNAAVGKTSMIVSYT 30
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 216 KCVVVGDGAVGITCLLISYT 275
K V+VGDGA G TCLLI ++
Sbjct: 7 KLVIVGDGACGKTCLLIVFS 26
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 31.1 bits (67), Expect = 0.12
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 216 KCVVVGDGAVGITCLLISYT 275
K V+VGDGA G TCLLI ++
Sbjct: 7 KLVIVGDGACGKTCLLIVFS 26
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 28.3 bits (60), Expect = 0.82
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 180 KISETVTNMQAI-KCVVVGDGAVGITCLL 263
+I E VT I K V VGD AVG TC L
Sbjct: 191 EIEEEVTQPDRIFKVVFVGDSAVGKTCFL 219
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 216 KCVVVGDGAVGITCLLISYT 275
K +++GD VG +CLL+ +T
Sbjct: 8 KYIIIGDTGVGKSCLLLQFT 27
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISYT 275
+K VVVGD G T LL++YT
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYT 25
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 26.6 bits (56), Expect = 2.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 216 KCVVVGDGAVGITCLLISYT 275
K +++GD VG +CLL+ +T
Sbjct: 8 KHIIIGDTGVGKSCLLLQFT 27
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISY 272
+K +++GD G TCLLI Y
Sbjct: 3 LKVMLLGDSCTGKTCLLIRY 22
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 213 IKCVVVGDGAVGITCLLISY 272
+K +++GD G TCLLI Y
Sbjct: 3 LKVMLLGDSCTGKTCLLIRY 22
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 186 SETVTNMQAIKCVVVGDGAVGITCL 260
++T + K ++VG+ AVG TCL
Sbjct: 92 TKTYKQKRTFKVIIVGNAAVGKTCL 116
>AC006662-2|AAL06035.1| 535|Caenorhabditis elegans Hypothetical
protein H23L24.3a protein.
Length = 535
Score = 26.2 bits (55), Expect = 3.3
Identities = 8/26 (30%), Positives = 20/26 (76%)
Frame = -2
Query: 193 VSDIFHKIKHKGCLTKRLGNALQIVI 116
+S +FH+++ +G TKRL + +++++
Sbjct: 197 LSTVFHQLESRGVKTKRLWHDIKLIL 222
>AC006662-1|AAM98008.2| 707|Caenorhabditis elegans Hypothetical
protein H23L24.3b protein.
Length = 707
Score = 26.2 bits (55), Expect = 3.3
Identities = 8/26 (30%), Positives = 20/26 (76%)
Frame = -2
Query: 193 VSDIFHKIKHKGCLTKRLGNALQIVI 116
+S +FH+++ +G TKRL + +++++
Sbjct: 369 LSTVFHQLESRGVKTKRLWHDIKLIL 394
>Z83238-6|CAB05800.1| 943|Caenorhabditis elegans Hypothetical
protein T08G3.7 protein.
Length = 943
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 190 SDIFHKIKHKGCLTKRLGNALQIVITTSNQYTMASQS 80
+D F+K KG T L NAL+I T S Q S
Sbjct: 62 NDWFNKHVAKGSSTNALSNALKIFETISGQIVALDSS 98
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 216 KCVVVGDGAVGITCLLISYT 275
K V++GDG VG + LL+ +T
Sbjct: 8 KYVIIGDGGVGKSNLLLRFT 27
>Z81542-4|CAB04418.1| 233|Caenorhabditis elegans Hypothetical
protein F49A5.6 protein.
Length = 233
Score = 25.4 bits (53), Expect = 5.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 194 CYKYASDQVCCRRRW 238
C KY SD+ CCR +
Sbjct: 172 CLKYQSDRECCRNEY 186
>Z92817-4|CAB07297.3| 633|Caenorhabditis elegans Hypothetical
protein W08G11.4 protein.
Length = 633
Score = 25.0 bits (52), Expect = 7.7
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 36 YCCYLKTVLFLYTSVD 83
+CC+++T+LF S+D
Sbjct: 590 FCCWIETILFEIKSID 605
>Z81123-5|CAB76411.2| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 214 IACIFVTVSDIFHKIKHKGCLTKRLGNALQIVITTSNQYTMASQST 77
++ IF+ +S + I + CL+KR NAL VI Y + ++T
Sbjct: 342 LSYIFLFISSAINPILY-ACLSKRFRNALSDVIHCRLVYKIFHRNT 386
>Z50071-9|CAA90404.3| 393|Caenorhabditis elegans Hypothetical
protein T07D4.1 protein.
Length = 393
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 214 IACIFVTVSDIFHKIKHKGCLTKRLGNALQIVITTSNQYTMASQST 77
++ IF+ +S + I + CL+KR NAL VI Y + ++T
Sbjct: 342 LSYIFLFISSAINPILY-ACLSKRFRNALSDVIHCRLVYKIFHRNT 386
>AL132847-4|CAB63373.3| 965|Caenorhabditis elegans Hypothetical
protein Y48G10A.4 protein.
Length = 965
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -1
Query: 158 MPHKTPRQRTTNCNHH*QSIHDGITINTRIKEQHSL*ITTIISYLYTGAS 9
+ H R NC + + D + I + HS+ +T + LYTGA+
Sbjct: 882 LEHNETRDVGANCADY---VTDVVAIELLSQHYHSMMMTKSLDTLYTGAN 928
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,492,833
Number of Sequences: 27780
Number of extensions: 126106
Number of successful extensions: 396
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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