Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I08
(274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 128 4e-31
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 128 4e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 112 3e-26
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 112 3e-26
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 112 4e-26
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 101 7e-23
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 99 4e-22
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 99 4e-22
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 64 2e-11
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 64 2e-11
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 58 8e-10
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 58 8e-10
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 49 4e-07
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 46 4e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 35 0.007
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 31 0.11
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 31 0.11
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 31 0.11
Z47357-1|CAA87421.2| 479|Caenorhabditis elegans Hypothetical pr... 25 5.5
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 25 5.5
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81549-3|CAB04468.1| 288|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 25 7.3
AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein. 25 7.3
AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like ... 25 7.3
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 25 9.7
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 25 9.7
L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical pr... 25 9.7
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 25 9.7
AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPS... 25 9.7
AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-l... 25 9.7
AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensor... 25 9.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 128 bits (310), Expect = 4e-31
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRT+PSYVAFTDTERLIGDAA+NQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MNPNNTI 272
MNP+NT+
Sbjct: 61 MNPHNTV 67
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 128 bits (310), Expect = 4e-31
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVA 251
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRT+PSYVAFTDTERLIGDAA+NQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 252 MNPNNTI 272
MNP+NT+
Sbjct: 61 MNPHNTV 67
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 112 bits (270), Expect = 3e-26
Identities = 47/67 (70%), Positives = 60/67 (89%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+T+PSYVAFTDTERL+GDAA++Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MNPNNTI 272
NP NT+
Sbjct: 61 RNPENTV 67
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 112 bits (270), Expect = 3e-26
Identities = 47/67 (70%), Positives = 60/67 (89%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+T+PSYVAFTDTERL+GDAA++Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MNPNNTI 272
NP NT+
Sbjct: 61 RNPENTV 67
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 112 bits (269), Expect = 4e-26
Identities = 47/67 (70%), Positives = 60/67 (89%)
Frame = +3
Query: 72 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVA 251
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+T+PSYVAFTDTERL+GDAA++Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 252 MNPNNTI 272
NP NT+
Sbjct: 61 RNPENTV 67
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 101 bits (242), Expect = 7e-23
Identities = 47/63 (74%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFT--DTERLIGDAAENQVAMNPN 263
+GIDLGTTYSCVGVF++G+VEIIANDQGNR +PSYVAF+ ERLIGDAA+NQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 264 NTI 272
NTI
Sbjct: 93 NTI 95
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 99.1 bits (236), Expect = 4e-22
Identities = 45/63 (71%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFT--DTERLIGDAAENQVAMNPN 263
+GIDLGTTYSCVGV+++G+VEIIANDQGNR +PSYVAF+ +RLIGDAA+NQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 264 NTI 272
NTI
Sbjct: 96 NTI 98
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 99.1 bits (236), Expect = 4e-22
Identities = 45/63 (71%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFT--DTERLIGDAAENQVAMNPN 263
+GIDLGTTYSCVGV+++G+VEIIANDQGNR +PSYVAF+ +RLIGDAA+NQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 264 NTI 272
NTI
Sbjct: 96 NTI 98
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFT-DTERLIGDAAENQVAM 254
K +GIDLGTT SCV + + ++I N +G RT+PS VAFT D ERL+G A+ Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 255 NPNNTI 272
N NT+
Sbjct: 90 NSANTL 95
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 63.7 bits (148), Expect = 2e-11
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 78 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFT-DTERLIGDAAENQVAM 254
K +GIDLGTT SCV + + ++I N +G RT+PS VAFT D ERL+G A+ Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 255 NPNNTI 272
N NT+
Sbjct: 90 NSANTL 95
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 58.0 bits (134), Expect = 8e-10
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAF-TDTERLIGDAAENQVAMNPN 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RT+PS +A D + LIG A++ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 N 266
+
Sbjct: 62 S 62
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 58.0 bits (134), Expect = 8e-10
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAF-TDTERLIGDAAENQVAMNPN 263
++GIDLGTT+SCV +Q+G+V I+ N+ G RT+PS +A D + LIG A++ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 264 N 266
+
Sbjct: 62 S 62
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 49.2 bits (112), Expect = 4e-07
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +3
Query: 93 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTSPSYVAFTDTER-LIGDAAENQVAMNPN 263
GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG A Q NP
Sbjct: 37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 264 NTI 272
TI
Sbjct: 97 RTI 99
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 90 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYVAFTDTERLIGDAAENQVAMNPNNT 269
+G D+G +GV + G +E+I ND +P+ V+F +R +G AA V N NT
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63
Query: 270 I 272
+
Sbjct: 64 V 64
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 35.1 bits (77), Expect = 0.007
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 87 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTSPSYVAFTDTERLIGDAA 236
A+ IDLGT + +G+ + G ++I N + R +P+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 60 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYV 197
K+N K A G+ G+ FQ G VE I N GN SP YV
Sbjct: 92 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 60 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYV 197
K+N K A G+ G+ FQ G VE I N GN SP YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.11
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +3
Query: 60 KRNKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTSPSYV 197
K+N K A G+ G+ FQ G VE I N GN SP YV
Sbjct: 280 KKNTDGKPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>Z47357-1|CAA87421.2| 479|Caenorhabditis elegans Hypothetical
protein ZK1128.2a protein.
Length = 479
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 60 KRNKMAKAPAVGIDLGTTYSCV 125
K NK+ K +GID+GT SC+
Sbjct: 94 KANKLTKN-VIGIDIGTGTSCI 114
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 25.4 bits (53), Expect = 5.5
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 76 QKHQQLVSIWAQPTLVWVCSSMGKLRSSPMTRATELLPRTLRSPTLSVL 222
QK ++ A PTL VCSS + +S T TE+ R LR +VL
Sbjct: 29 QKFKRFFPPNAPPTLWEVCSSKQRSKSLKNTFQTEV--RALRGLNFTVL 75
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 25.4 bits (53), Expect = 5.5
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 76 QKHQQLVSIWAQPTLVWVCSSMGKLRSSPMTRATELLPRTLRSPTLSVL 222
QK ++ A PTL VCSS + +S T TE+ R LR +VL
Sbjct: 29 QKFKRFFPPNAPPTLWEVCSSKQRSKSLKNTFQTEV--RALRGLNFTVL 75
>Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical
protein K11D9.1b protein.
Length = 689
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 15 SSSYELFND*LSIRYKRNKMAKAPAVGI 98
+ +Y+L ND +R +KM K VG+
Sbjct: 411 TKTYDLLNDKAELRVLEDKMQKVQVVGL 438
>Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical
protein K11D9.1a protein.
Length = 747
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 15 SSSYELFND*LSIRYKRNKMAKAPAVGI 98
+ +Y+L ND +R +KM K VG+
Sbjct: 469 TKTYDLLNDKAELRVLEDKMQKVQVVGL 496
>Z81549-3|CAB04468.1| 288|Caenorhabditis elegans Hypothetical
protein F55C9.4 protein.
Length = 288
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 256 FIATWFSAASPIRRSVSVNATYEGEVLLPWSLAMISTFPCWNTPTQ 119
F+ W A+ + ++ V Y E ++ + CWNTP Q
Sbjct: 210 FLKHWIKGANEVVETLYVEIEYVNE----FTDLIFRDIKCWNTPKQ 251
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 242 VLGCITDKTLSVGERNVRGRSSVALVIGDDLNFPMLEHTHTR 117
V C D+T + +N+ S +V+GD N + + T+ R
Sbjct: 404 VYSCALDQTGLLEMKNMFNSSGGHVVMGDSFNSSLFKQTYQR 445
>AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein.
Length = 747
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 15 SSSYELFND*LSIRYKRNKMAKAPAVGI 98
+ +Y+L ND +R +KM K VG+
Sbjct: 469 TKTYDLLNDKAELRVLEDKMQKVQVVGL 496
>AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like
protein (klp-7) protein.
Length = 689
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 15 SSSYELFND*LSIRYKRNKMAKAPAVGI 98
+ +Y+L ND +R +KM K VG+
Sbjct: 411 TKTYDLLNDKAELRVLEDKMQKVQVVGL 438
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 66 NKMAKAPAVGIDLGTTYSCVGV 131
N + AP G DLG+T+S + V
Sbjct: 249 NITSSAPITGFDLGSTWSMLAV 270
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 86 SSWYRSGHNLLLCGCVPAWES*DHRQ*PGQQN 181
SSW + H+ LL +E H PG+Q+
Sbjct: 296 SSWQKQSHSSLLSNSELMYEFMTHNYRPGEQD 327
>L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical
protein K02D10.1b protein.
Length = 289
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 86 SSWYRSGHNLLLCGCVPAWES*DHRQ*PGQQN 181
SSW + H+ LL +E H PG+Q+
Sbjct: 59 SSWQKQSHSSLLSNSELMYEFMTHNYRPGEQD 90
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 66 NKMAKAPAVGIDLGTTYSCVGV 131
N + AP G DLG+T+S + V
Sbjct: 249 NITSSAPITGFDLGSTWSMLAV 270
>AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPSNAP
protein protein.
Length = 231
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 86 SSWYRSGHNLLLCGCVPAWES*DHRQ*PGQQN 181
SSW + H+ LL +E H PG+Q+
Sbjct: 1 SSWQKQSHSSLLSNSELMYEFMTHNYRPGEQD 32
>AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-like
protein MEC-6 protein.
Length = 377
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 150 EIIANDQGNRTSPSYVAFTDTERLIGDA 233
E AND ++ S V FTD + LIG +
Sbjct: 335 EPYANDGATISASSSVVFTDEQMLIGSS 362
>AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensory
abnormality protein6 protein.
Length = 377
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 150 EIIANDQGNRTSPSYVAFTDTERLIGDA 233
E AND ++ S V FTD + LIG +
Sbjct: 335 EPYANDGATISASSSVVFTDEQMLIGSS 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,287,678
Number of Sequences: 27780
Number of extensions: 118336
Number of successful extensions: 309
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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