Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I07
(327 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 85 1e-17
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 83 7e-17
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 56 9e-09
02_03_0349 + 18010414-18014283 29 0.86
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911... 28 2.0
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 28 2.0
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 27 2.6
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 26 6.1
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 26 6.1
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 26 6.1
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 26 8.0
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 26 8.0
04_03_0326 + 14403825-14403937,14404030-14404261 26 8.0
04_01_0229 - 2897484-2900402 26 8.0
02_01_0255 - 1674417-1674488,1674670-1675322,1676132-1676195,167... 26 8.0
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 26 8.0
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 85.0 bits (201), Expect = 1e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3
Query: 132 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 311
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL+I GSLARRA+ +L D+GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDLMDRGLIRMVSVH 96
Query: 312 HGQVI 326
Q I
Sbjct: 97 CSQQI 101
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 82.6 bits (195), Expect = 7e-17
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +3
Query: 132 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 311
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL+I GSLARRA+ +L +GLI+ V H
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 96
Query: 312 HGQVI 326
Q I
Sbjct: 97 SSQQI 101
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 55.6 bits (128), Expect = 9e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +3
Query: 132 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 236
+NN VLFDK TY+KL EVP+YK ITP+V+SERL+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 156 KPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRD 281
KPT E+L K +PQ K++ AV E + + L +LRD
Sbjct: 39 KPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRD 80
>10_06_0110 +
10889414-10889669,10889756-10889806,10890595-10891163,
10891178-10891660,10891747-10891944,10893300-10893354,
10893372-10893631
Length = 623
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 20 GHKGLG*AAAEDPKEEGGIRWRQSQEEEVVKR 115
G KG A A PKE+GG + ++ +EEE K+
Sbjct: 550 GWKGREVALAPWPKEKGGRKQKREEEEEEEKK 581
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 204 ITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
+TPAV E+ + + AR+ L + R+ I+ +QH+ Q++
Sbjct: 613 LTPAVYLEQHRFKLEKARQRLTDHRECQNIEATIQHNQQLV 653
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 112 FDHFFFLALPPPDPSFFFWVFCGCLAEAF 26
F FF +PPP +F WV G L F
Sbjct: 313 FVEVFFTKIPPPQNNFCSWVGEGALEAGF 341
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 201 LITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
++TPA E+ + + A++ LVE R++ I+ +Q + Q++
Sbjct: 167 VLTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLV 208
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 171 KLYKEVPQYKLITPAVVSERLKIRGSLARRALVELR 278
+ Y + YK + A+++ + RG +ARR L EL+
Sbjct: 770 RCYLVLSNYKRMMKAIITTQCAWRGRVARRELRELK 805
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 235 FNLSETTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPFDHFFFL 92
F +++ A +I++Y + S +G + WL+NL FP D FL
Sbjct: 843 FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 235 FNLSETTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPFDHFFFL 92
F +++ A +I++Y + S +G + WL+NL FP D FL
Sbjct: 774 FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 8 RGQEGHKGLG*AAAEDPKEEGGIRWRQSQEEE 103
RG+ KG G AA P EE + +S+EEE
Sbjct: 15 RGRGRGKGRGRAADATPVEEVDVEGAKSEEEE 46
>04_03_0326 + 14403825-14403937,14404030-14404261
Length = 114
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 159 PTYEKLYKEVPQYKLITPAVVSERLKIRGSLARR 260
P +++++++P +TP+ SERL+ +ARR
Sbjct: 46 PGIKEVWRQLPYPPFVTPSPSSERLQRDVEVARR 79
>04_01_0229 - 2897484-2900402
Length = 972
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 238 IFNLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRT 119
++++ T AGVI + G L FS + + LF+LSR+
Sbjct: 266 LYDIMYTKAGVIHTWYGYCLRVFSPLATAAALLLFHLSRS 305
>02_01_0255 -
1674417-1674488,1674670-1675322,1676132-1676195,
1676295-1676381
Length = 291
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 183 PYTVSHMWVCQTTLGCLTCHGLFLLT 106
P ++H+ C+ T GCL H F T
Sbjct: 263 PGIINHVATCRFTKGCLLLHNSFQRT 288
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 133 NLSRTFPFDHFFFLALPPPDP 71
N++ FDH L LPPP P
Sbjct: 59 NIAAKAAFDHLSSLPLPPPPP 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,045,780
Number of Sequences: 37544
Number of extensions: 141750
Number of successful extensions: 411
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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