Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I07
         (327 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p pro...   132   1e-31
AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB...   132   1e-31
AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA...   132   1e-31
U03289-1|AAA03464.1|  113|Drosophila melanogaster protein ( Dros...   128   2e-30
X68259-1|CAA48327.1|  464|Drosophila melanogaster elg protein.         29   1.0  
BT025224-1|ABF17915.1|  464|Drosophila melanogaster FI01018p pro...    29   1.0  
AY070960-1|AAL48582.1|  394|Drosophila melanogaster RE06142p pro...    29   1.0  
AE014297-4021|AAF56638.1|  464|Drosophila melanogaster CG6338-PA...    29   1.0  

>AY071076-1|AAL48698.1|  117|Drosophila melanogaster RE14595p
           protein.
          Length = 117

 Score =  132 bits (319), Expect = 1e-31
 Identities = 68/104 (65%), Positives = 73/104 (70%)
 Frame = +3

Query: 15  KKDTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQ 194
           KKD K+SAKQPQ                           LNNQVLFDK TYEKLYKEVP 
Sbjct: 4   KKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPA 63

Query: 195 YKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           YKLITP+VVSERLKIRGSLA+RAL+ELR+KGLIKQVVQHH QVI
Sbjct: 64  YKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVI 107


>AE014297-1258|AAF54605.2|  117|Drosophila melanogaster CG6684-PB,
           isoform B protein.
          Length = 117

 Score =  132 bits (319), Expect = 1e-31
 Identities = 68/104 (65%), Positives = 73/104 (70%)
 Frame = +3

Query: 15  KKDTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQ 194
           KKD K+SAKQPQ                           LNNQVLFDK TYEKLYKEVP 
Sbjct: 4   KKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPA 63

Query: 195 YKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           YKLITP+VVSERLKIRGSLA+RAL+ELR+KGLIKQVVQHH QVI
Sbjct: 64  YKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVI 107


>AE014297-1257|AAN13495.1|  117|Drosophila melanogaster CG6684-PA,
           isoform A protein.
          Length = 117

 Score =  132 bits (319), Expect = 1e-31
 Identities = 68/104 (65%), Positives = 73/104 (70%)
 Frame = +3

Query: 15  KKDTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQ 194
           KKD K+SAKQPQ                           LNNQVLFDK TYEKLYKEVP 
Sbjct: 4   KKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPA 63

Query: 195 YKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           YKLITP+VVSERLKIRGSLA+RAL+ELR+KGLIKQVVQHH QVI
Sbjct: 64  YKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVI 107


>U03289-1|AAA03464.1|  113|Drosophila melanogaster protein (
           Drosophila melanogasterSevelin ribosomal protein homolog
           gene, partial cds. ).
          Length = 113

 Score =  128 bits (308), Expect = 2e-30
 Identities = 66/103 (64%), Positives = 71/103 (68%)
 Frame = +3

Query: 18  KDTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQY 197
           KD K+SAKQPQ                           LNNQVLFDK TYEKLYKEVP Y
Sbjct: 1   KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60

Query: 198 KLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           KLITP+VVSERLKIRGSL +RAL+ELR+KGLIKQVVQHH QVI
Sbjct: 61  KLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQHHSQVI 103


>X68259-1|CAA48327.1|  464|Drosophila melanogaster elg protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -3

Query: 226 SETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFC 47
           +E T   ++ +   ++  F  VG++ + W  N        H  F    P DP   FW   
Sbjct: 203 NEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHL 262

Query: 46  GCLAEA-FVS 20
             L E  FVS
Sbjct: 263 QLLKECNFVS 272


>BT025224-1|ABF17915.1|  464|Drosophila melanogaster FI01018p
           protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -3

Query: 226 SETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFC 47
           +E T   ++ +   ++  F  VG++ + W  N        H  F    P DP   FW   
Sbjct: 203 NEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHL 262

Query: 46  GCLAEA-FVS 20
             L E  FVS
Sbjct: 263 QLLKECNFVS 272


>AY070960-1|AAL48582.1|  394|Drosophila melanogaster RE06142p
           protein.
          Length = 394

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -3

Query: 226 SETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFC 47
           +E T   ++ +   ++  F  VG++ + W  N        H  F    P DP   FW   
Sbjct: 203 NEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHL 262

Query: 46  GCLAEA-FVS 20
             L E  FVS
Sbjct: 263 QLLKECNFVS 272


>AE014297-4021|AAF56638.1|  464|Drosophila melanogaster CG6338-PA
           protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -3

Query: 226 SETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFC 47
           +E T   ++ +   ++  F  VG++ + W  N        H  F    P DP   FW   
Sbjct: 203 NEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHL 262

Query: 46  GCLAEA-FVS 20
             L E  FVS
Sbjct: 263 QLLKECNFVS 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,162
Number of Sequences: 53049
Number of extensions: 229678
Number of successful extensions: 613
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)