Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I07
         (327 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41558-4|AAK39246.1|  117|Caenorhabditis elegans Ribosomal prote...    98   2e-21
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    27   2.4  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    27   2.4  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    27   2.4  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    27   2.4  
Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical p...    27   4.2  
U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical p...    27   4.2  
AC006680-8|AAK72298.1|  355|Caenorhabditis elegans Serpentine re...    27   4.2  
AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical ...    26   5.6  
AC006780-5|AAF60646.1|  287|Caenorhabditis elegans Hypothetical ...    26   5.6  
AC006780-4|AAO21411.1|  312|Caenorhabditis elegans Hypothetical ...    26   5.6  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    26   7.4  
AL132898-10|CAC14416.2|  346|Caenorhabditis elegans Hypothetical...    26   7.4  
Z81509-4|CAB04152.2|  236|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z47074-1|CAA87375.2|  851|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z19555-3|CAA79616.1|  182|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U80027-22|AAC48112.1|  336|Caenorhabditis elegans Seven tm recep...    25   9.7  
AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...    25   9.7  
AF047655-11|AAC04405.1|  336|Caenorhabditis elegans Seven tm rec...    25   9.7  
AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine re...    25   9.7  

>U41558-4|AAK39246.1|  117|Caenorhabditis elegans Ribosomal protein,
           small subunitprotein 25 protein.
          Length = 117

 Score = 97.9 bits (233), Expect = 2e-21
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = +3

Query: 132 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 311
           LNN VLFD+ TY+KLYKEV  YKLITP+VVSERLK+R SLA+  L EL+ KGL+K VV H
Sbjct: 40  LNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCVVHH 99

Query: 312 HGQVI 326
           HGQV+
Sbjct: 100 HGQVV 104


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 202 SLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFCGCLAEAFV 23
           SL CG    +  Y+ LS  TW+  L   +   H     + P DP  F ++  G +  A +
Sbjct: 609 SLQCGIIAVALMYMFLSALTWM--LLEGYHI-HRMLTEVFPSDPRRFTYLLVGYIPPAII 665

Query: 22  SFLA 11
           + +A
Sbjct: 666 TLVA 669


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 202 SLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFCGCLAEAFV 23
           SL CG    +  Y+ LS  TW+  L   +   H     + P DP  F ++  G +  A +
Sbjct: 611 SLQCGIIAVALMYMFLSALTWM--LLEGYHI-HRMLTEVFPSDPRRFTYLLVGYIPPAII 667

Query: 22  SFLA 11
           + +A
Sbjct: 668 TLVA 671


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 202 SLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFCGCLAEAFV 23
           SL CG    +  Y+ LS  TW+  L   +   H     + P DP  F ++  G +  A +
Sbjct: 609 SLQCGIIAVALMYMFLSALTWM--LLEGYHI-HRMLTEVFPSDPRRFTYLLVGYIPPAII 665

Query: 22  SFLA 11
           + +A
Sbjct: 666 TLVA 669


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = -3

Query: 202 SLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLALPPPDPSFFFWVFCGCLAEAFV 23
           SL CG    +  Y+ LS  TW+  L   +   H     + P DP  F ++  G +  A +
Sbjct: 611 SLQCGIIAVALMYMFLSALTWM--LLEGYHI-HRMLTEVFPSDPRRFTYLLVGYIPPAII 667

Query: 22  SFLA 11
           + +A
Sbjct: 668 TLVA 671


>Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical
           protein Y57G11C.33 protein.
          Length = 177

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 234 STFQRQQRV*SACTVVLPYTVSHMWVCQTTLGCLTCHGLFLLTTSS 97
           +T  R  R+ +    + P T+      +T LGC TC+  + +T S+
Sbjct: 73  NTIVRINRIFADAEAITPQTIF-----ETVLGCFTCYASYAITKST 113


>U00048-11|AAB53833.1|  995|Caenorhabditis elegans Hypothetical
           protein C05D11.1 protein.
          Length = 995

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 138 NQVLFDKPTYEKLYKEVPQYKLITPAVVSERL-KIRGSL 251
           N +LFD+   EKL++++ +  +  P  V E+L ++R +L
Sbjct: 694 NCILFDELVLEKLHEKISKDVMKNPEAVLEKLEQVRSAL 732


>AC006680-8|AAK72298.1|  355|Caenorhabditis elegans Serpentine
           receptor, class t protein6 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = -3

Query: 244 PRIF-NLSETTAGVISLYCGTSLYSF-SY-----VGLSNNTWLFNLSRTFPFDHFFFLAL 86
           P IF +  ET + ++ + C  +LY + SY     +G S +TWL+   R   F        
Sbjct: 192 PDIFVSHPETVSNIVLVICTGTLYLYLSYNLLFKLGYSTSTWLYKTKRQIIFQAVILCVF 251

Query: 85  PPPDPSFF-FWVFC 47
                  + F +FC
Sbjct: 252 HATVAGLYSFMMFC 265


>AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical
           protein C52E2.4 protein.
          Length = 658

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 178 YSFSYVGLSNNTWLFNLSRTFPFDHFFFLAL 86
           Y+F  +G++N + L  LS    F+HF  L L
Sbjct: 3   YAFKLLGIANESTLTVLSLRLAFNHFVELRL 33


>AC006780-5|AAF60646.1|  287|Caenorhabditis elegans Hypothetical
           protein Y47D9A.2a protein.
          Length = 287

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 171 KLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           +L   +P Y +I       RL +   +A   + E  D+ LI QVVQ H Q++
Sbjct: 235 RLRDHIPFYSIIHQQEGPGRLPLL-EVAPPPVTEPNDEQLITQVVQKHPQLV 285


>AC006780-4|AAO21411.1|  312|Caenorhabditis elegans Hypothetical
           protein Y47D9A.2b protein.
          Length = 312

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 171 KLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVI 326
           +L   +P Y +I       RL +   +A   + E  D+ LI QVVQ H Q++
Sbjct: 260 RLRDHIPFYSIIHQQEGPGRLPLL-EVAPPPVTEPNDEQLITQVVQKHPQLV 310


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
           protein W02C12.1 protein.
          Length = 1372

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 266 KCSPGKGASDLQPFRDNSGCDQLVLWYFLI 177
           KC    G+   +P R+N  C  LV  YF +
Sbjct: 252 KCEQDNGSCAAKPCRNNGFCVSLVADYFCV 281


>AL132898-10|CAC14416.2|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.21 protein.
          Length = 346

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 229 LSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFLA 89
           LS TT+G+  L    S +    +G    T+LF ++  FPF  F F++
Sbjct: 293 LSTTTSGI--LLAAISQFYLKAIGY---TYLFIITSIFPFCAFIFIS 334


>Z81509-4|CAB04152.2|  236|Caenorhabditis elegans Hypothetical
           protein F21A3.6 protein.
          Length = 236

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 165 YEKLYKEVPQYKLITP---AVVSERLKIRGSLARRALVELRDKGLI 293
           + +L+ E P+YKLI P   A+    L     L R A V L   G I
Sbjct: 112 FVRLFSEYPRYKLIWPQFRAIPDSSLMNAVELRRHASVYLNGLGKI 157


>Z47074-1|CAA87375.2|  851|Caenorhabditis elegans Hypothetical
           protein K07C10.1 protein.
          Length = 851

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 208 VISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFD 107
           VI LY   S+++ SY G++     F+ S+TFP D
Sbjct: 476 VIILYF--SIFTASYFGVAKMEKTFDPSKTFPSD 507


>Z19555-3|CAA79616.1|  182|Caenorhabditis elegans Hypothetical
           protein F02A9.2 protein.
          Length = 182

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 159 PTYEKLYKEVP-QYKLITPAVVSERLK 236
           P   + Y ++P +YK + PA VSE LK
Sbjct: 21  PEVPENYDDIPAEYKSLIPAEVSEHLK 47


>U80027-22|AAC48112.1|  336|Caenorhabditis elegans Seven tm receptor
           protein 64 protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 215 SGCDQLVLWYFLIQFL 168
           SGC  L++W+  +QF+
Sbjct: 95  SGCHTLIIWFIAMQFI 110


>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = -2

Query: 320 LPMVLDYLFD*TFISKFDKCSPGKGASDLQPFRDNSGCDQLVLWYFLIQFLICGFVKQHL 141
           LP+ + +L + T    F  C+ G G   + P  +NS      L  F+    + G+    +
Sbjct: 249 LPLEVRFLHEPTSEHAFVGCALGSGIFRIHPVEENSTTHAATLVAFIPSKKVSGWALPEM 308

Query: 140 VV*LVTD 120
              L+TD
Sbjct: 309 PA-LITD 314


>AF047655-11|AAC04405.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 63 protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 215 SGCDQLVLWYFLIQFL 168
           SGC  L++W+  +QF+
Sbjct: 95  SGCHTLIIWFIAMQFI 110


>AC006675-2|AAK84549.1|  333|Caenorhabditis elegans Serpentine
           receptor, class h protein34 protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = -3

Query: 136 FNLSRTFPFDHFFFLALPPPDPSFFFWVF---CGCL 38
           F+++  FPF H+  L   P    F  W+    C C+
Sbjct: 24  FSIAIIFPFTHYCVLTKSPKSFGFLKWIIYFHCCCV 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,685,291
Number of Sequences: 27780
Number of extensions: 117910
Number of successful extensions: 461
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)