Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I06
         (318 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   1.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   6.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 108 RSPSCT*ERTLQSPHSVQSDPI 43
           +S S +  R+ +SP SVQ DP+
Sbjct: 446 QSDSSSSSRSAESPMSVQVDPM 467


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 111 YYIWSFQGKIIRRVMKEGFAQFH 179
           ++IW+  G + R V+ +    FH
Sbjct: 175 HWIWTPHGWMRRNVLNKQHVHFH 197


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
          protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 7  RHEATITRCRASNGIRLDAMW 69
          R      RC A++G+R   +W
Sbjct: 15 RESRCSVRCSAASGLRWFEIW 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,336
Number of Sequences: 438
Number of extensions: 1504
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)