Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I05
(337 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 64 4e-11
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 60 4e-10
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615... 54 2e-08
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 36 0.011
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 29 0.93
05_04_0409 - 21050479-21050637,21050732-21050872,21051170-210515... 29 1.2
08_02_0695 + 20122838-20122949,20123238-20123335,20123520-201236... 27 2.9
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169... 27 2.9
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 27 3.8
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 27 5.0
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 27 5.0
02_03_0126 - 15536727-15537353 27 5.0
09_03_0154 + 12831120-12831222,12831761-12831858,12832019-128321... 26 6.6
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 26 6.6
01_06_0241 - 27813076-27813622,27813695-27814125 26 6.6
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 26 8.7
10_08_0735 - 20200229-20200693,20200813-20201823,20202172-202022... 26 8.7
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 63.7 bits (148), Expect = 4e-11
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Frame = +3
Query: 60 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHIA 239
+ L +V + GL +L++YL RSY+SGY S+ D+ VF + PAAS +V RWY HI+
Sbjct: 22 ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHIS 81
Query: 240 SYTPAERKT-WSEGVS------PLTAGAKPRAPAAPSND 335
+ + T EGV ++ A +APAA D
Sbjct: 82 ALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEED 120
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 60.1 bits (139), Expect = 4e-10
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +3
Query: 72 DVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHIASYTP 251
D+ TA GL L Q+L+ ++YVSG S+ DIKVF V P A P+ RWY +A+
Sbjct: 7 DLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALA 66
Query: 252 AERKTWSEGVS-PLTAGAKPRAPAAPS 329
+ + GV+ P A A AAP+
Sbjct: 67 SRFPGKAVGVNLPGGGAASSAAAAAPA 93
>07_03_1260 -
25260872-25261101,25261199-25261312,25261473-25261596,
25261755-25261839,25261917-25262033,25262122-25262207
Length = 251
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 72 DVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHI 236
+V + GL +L++YL RSY+SGY S D+ V+ P++S +V RW++HI
Sbjct: 7 NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHI 61
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Frame = +3
Query: 93 LNELNQYLAERSYV--SGYTPSQADIKVFEQV-------GKVPAASLPHVLRWYSHI 236
L LNQ L+++S + +G+ PS ADI VF + G+ PHVLRW +I
Sbjct: 76 LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 29.1 bits (62), Expect = 0.93
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +3
Query: 84 AQGLNELNQYLAERSYVSGYTPSQADIKVFEQV---GKVPAASL----PHVLRWYSHIAS 242
AQ L+ + +LA Y++G S AD + K P A L PHV W+ I+S
Sbjct: 145 AQVLDVYDAHLAGSRYLAGNRFSLADANHMSYLLFLSKTPMAELVASRPHVKAWWDDISS 204
Query: 243 YTPAERKT 266
PA +KT
Sbjct: 205 -RPAWKKT 211
>05_04_0409 -
21050479-21050637,21050732-21050872,21051170-21051541,
21051699-21051701
Length = 224
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 198 ASLPHVLRWYSHIASYTPAERKTWSEGVSPLTAGAKPRAPAAP 326
AS PH W+SH++ T A R +G L G + R P P
Sbjct: 46 ASGPHSYDWFSHLSRGTRAWRLALQKGRCSL-GGERGRGPPKP 87
>08_02_0695 +
20122838-20122949,20123238-20123335,20123520-20123696,
20123790-20123890,20124049-20124124,20124213-20124272,
20124362-20124546,20124638-20124734,20124817-20124903,
20124989-20125047,20125157-20125248,20125436-20125513,
20125617-20125777,20125880-20126098
Length = 533
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 108 QYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHV 215
QY E + V+GY P + F + VP AS P V
Sbjct: 441 QYFNEYTSVAGYGPVHTGARWFNDMINVPFASKPFV 476
>06_03_0741 -
24016204-24016298,24016408-24016525,24016805-24016903,
24016992-24017117,24017200-24017277,24017366-24017554,
24018186-24018338,24018785-24018898,24019576-24019761,
24019845-24019970,24020053-24020248,24020338-24020438,
24020533-24020610,24020707-24020952,24021063-24022253
Length = 1031
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 234 IASYTPAERKTWSEGVSPLTAGAKPRAPAAPS 329
+A+ T S G+S L G++PRAP P+
Sbjct: 17 LAAATAESPAAPSRGISTLAKGSRPRAPPRPA 48
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +3
Query: 102 LNQYLAERSYVSGYTPSQADIKVFEQVGKV--------PAASLPHVLRWYSHIASYTPAE 257
L+ YLA R+++ Y S ADI V+ + + +++RW++ IA Y+
Sbjct: 102 LDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSIADYSDTL 161
Query: 258 RKTWSEGVSPLTAGAKPRAPA 320
+ S V G P AP+
Sbjct: 162 DEVVSAYVGKRGIGKSP-APS 181
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +3
Query: 144 TPSQADIKVFEQVGKVPAASLPHVLRWYSHIASYTPAERKTWSEGVSPLTAGAKPRAPAA 323
TP ++V + P+AS P S T G S ++ A PRAPAA
Sbjct: 609 TPHLRALRVSVPRPRAPSASAPPAAAPREWTVSLTTGRYSFGDSGAS--SSSAAPRAPAA 666
Query: 324 P 326
P
Sbjct: 667 P 667
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 135 SGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHIASYTPAERKTWSEGVSPL 290
SG TP D ++ P LPHV+ + +TP ++ S GVS L
Sbjct: 510 SGITPPLPD-----EIALPPRGRLPHVIVHLDEMEDWTPGPPRSPSFGVSGL 556
>02_03_0126 - 15536727-15537353
Length = 208
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 84 AQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL 206
A G ++NQ LA++S + KV E+ ++ +ASL
Sbjct: 17 ALGAFDVNQMLADKSQYGSFLKLLTQTKVAEETNRLKSASL 57
>09_03_0154 +
12831120-12831222,12831761-12831858,12832019-12832195,
12832307-12832407,12832503-12832578,12832665-12832724,
12832810-12832994,12833078-12833174,12833279-12833365,
12833453-12833511,12833617-12833708,12833821-12833898,
12834000-12834160,12834267-12834485
Length = 530
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 108 QYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHV 215
QY E + V+GY P + F + VP +S P V
Sbjct: 438 QYFNEYTAVAGYGPVHTGARWFNDMINVPFSSKPFV 473
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 219 RWYSHIASYTPAERKTWSEGVSPLTAGAKPRAPAA 323
RW+ S TP + G AG +PR PAA
Sbjct: 448 RWHRDAGSGTPRQISPTLSGSGLPGAGGQPRGPAA 482
>01_06_0241 - 27813076-27813622,27813695-27814125
Length = 325
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 87 QGLNELNQYLAERSYVSGYTPSQAD 161
QG N +N+YL++ + ++ Y P + D
Sbjct: 216 QGNNSVNEYLSQFNKLARYAPEEVD 240
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 197 SRYFADLLKYFNISLRRSVSRHITSFS*ILVQFI*PLSGFNVSQCHFSIRNLIYSSKP 24
SR+F +L ++ ISL S I + FI F + HF++ + I+ KP
Sbjct: 71 SRFFRGILNFYGISLHHLNSNSIVH----IANFIHACEAFLGIRPHFALFHRIFFLKP 124
>10_08_0735 -
20200229-20200693,20200813-20201823,20202172-20202272,
20203424-20203562
Length = 571
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 111 YLAERSYVSGYTPSQADIKVFE 176
Y+A R Y+ G PS ++K+++
Sbjct: 537 YVAIRKYIIGRVPSSVELKIYQ 558
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,622,102
Number of Sequences: 37544
Number of extensions: 173148
Number of successful extensions: 457
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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