Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_I02
(268 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 44 3e-05
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 44 3e-05
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 44 3e-05
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 34 0.031
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 31 0.29
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 31 0.29
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 31 0.29
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 31 0.29
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 30 0.39
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 30 0.39
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 30 0.39
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 30 0.39
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 30 0.39
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 30 0.39
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 30 0.39
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 29 0.89
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 29 0.89
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 29 0.89
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 29 0.89
AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein. 27 3.6
AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA... 27 3.6
BT021258-1|AAX33406.1| 689|Drosophila melanogaster RE56001p pro... 26 6.3
BT003304-1|AAO25064.1| 761|Drosophila melanogaster GH09546p pro... 26 6.3
AF181629-1|AAD55415.1| 639|Drosophila melanogaster BcDNA.GH0463... 26 6.3
AE013599-3598|AAF46998.2| 761|Drosophila melanogaster CG3530-PA... 26 6.3
AE013599-3597|AAF46997.2| 689|Drosophila melanogaster CG3530-PB... 26 6.3
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 26 8.3
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 18/61 (29%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDA------------------GFNRQREKCFEWNRT 265
S+ CYKCNR GHFAR+C+ GG G G R REKC++ N+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQF 63
Query: 266 G 268
G
Sbjct: 64 G 64
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 128 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTG 268
++ + CY+CN+TGH+ R C + V R C++ NRTG
Sbjct: 91 TQADNPTCYRCNKTGHWVRNCPE-AVNER----GPTNVSCYKCNRTG 132
Score = 33.5 bits (73), Expect = 0.041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCN+ GHFAR C +
Sbjct: 57 CYKCNQFGHFARACPE 72
Score = 33.5 bits (73), Expect = 0.041
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 31.5 bits (68), Expect = 0.17
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+CN GH +++CTQ
Sbjct: 77 CYRCNGIGHISKDCTQ 92
Score = 31.5 bits (68), Expect = 0.17
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 137 SSSVCYKCNRTGHFARECTQGG 202
+S CY C ++GH REC + G
Sbjct: 141 TSKTCYGCGKSGHLRRECDEKG 162
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 18/61 (29%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDA------------------GFNRQREKCFEWNRT 265
S+ CYKCNR GHFAR+C+ GG G G R REKC++ N+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQF 63
Query: 266 G 268
G
Sbjct: 64 G 64
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 128 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTG 268
++ + CY+CN+TGH+ R C + V R C++ NRTG
Sbjct: 91 TQADNPTCYRCNKTGHWVRNCPE-AVNER----GPTNVSCYKCNRTG 132
Score = 33.5 bits (73), Expect = 0.041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCN+ GHFAR C +
Sbjct: 57 CYKCNQFGHFARACPE 72
Score = 33.5 bits (73), Expect = 0.041
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 31.5 bits (68), Expect = 0.17
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+CN GH +++CTQ
Sbjct: 77 CYRCNGIGHISKDCTQ 92
Score = 31.5 bits (68), Expect = 0.17
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 137 SSSVCYKCNRTGHFARECTQGG 202
+S CY C ++GH REC + G
Sbjct: 141 TSKTCYGCGKSGHLRRECDEKG 162
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 18/61 (29%)
Frame = +2
Query: 140 SSVCYKCNRTGHFARECTQGGVGARDA------------------GFNRQREKCFEWNRT 265
S+ CYKCNR GHFAR+C+ GG G G R REKC++ N+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQF 63
Query: 266 G 268
G
Sbjct: 64 G 64
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 128 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFEWNRTG 268
++ + CY+CN+TGH+ R C + V R C++ NRTG
Sbjct: 91 TQADNPTCYRCNKTGHWVRNCPE-AVNER----GPTNVSCYKCNRTG 132
Score = 33.5 bits (73), Expect = 0.041
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCN+ GHFAR C +
Sbjct: 57 CYKCNQFGHFARACPE 72
Score = 33.5 bits (73), Expect = 0.041
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 31.5 bits (68), Expect = 0.17
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+CN GH +++CTQ
Sbjct: 77 CYRCNGIGHISKDCTQ 92
Score = 31.5 bits (68), Expect = 0.17
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 137 SSSVCYKCNRTGHFARECTQGG 202
+S CY C ++GH REC + G
Sbjct: 141 TSKTCYGCGKSGHLRRECDEKG 162
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 33.9 bits (74), Expect = 0.031
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 137 SSSVCYKCNRTGHFARECTQGGVGAR 214
S+ CY+C + GHF+ +C + G A+
Sbjct: 241 SNVTCYRCGQPGHFSNQCPKNGTAAK 266
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 30.7 bits (66), Expect = 0.29
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQG 199
CYKC GH+A +C +G
Sbjct: 268 CYKCGNKGHYANKCPKG 284
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 30.7 bits (66), Expect = 0.29
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQG 199
CYKC GH+A +C +G
Sbjct: 292 CYKCGNKGHYANKCPKG 308
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 30.7 bits (66), Expect = 0.29
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQG 199
CYKC GH+A +C +G
Sbjct: 268 CYKCGNKGHYANKCPKG 284
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 30.7 bits (66), Expect = 0.29
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQG 199
CYKC GH+A +C +G
Sbjct: 268 CYKCGNKGHYANKCPKG 284
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 30.3 bits (65), Expect = 0.39
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 149 CYKCNRTGHFAREC 190
CY+C R+GH+++EC
Sbjct: 170 CYRCGRSGHWSKEC 183
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 29.1 bits (62), Expect = 0.89
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+C GHFAR C +
Sbjct: 117 CYECGGRGHFARHCRE 132
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 29.1 bits (62), Expect = 0.89
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+C GHFAR C +
Sbjct: 117 CYECGGRGHFARHCRE 132
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 29.1 bits (62), Expect = 0.89
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+C GHFAR C +
Sbjct: 117 CYECGGRGHFARHCRE 132
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 29.1 bits (62), Expect = 0.89
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQ 196
CY+C GHFAR C +
Sbjct: 117 CYECGGRGHFARHCRE 132
>AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.
Length = 1530
Score = 27.1 bits (57), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGG 202
C++C GHFA++C G
Sbjct: 628 CFQCGGVGHFAQQCKVKG 645
>AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA
protein.
Length = 1579
Score = 27.1 bits (57), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGG 202
C++C GHFA++C G
Sbjct: 677 CFQCGGVGHFAQQCKVKG 694
>BT021258-1|AAX33406.1| 689|Drosophila melanogaster RE56001p
protein.
Length = 689
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
+GRL L A S C CS L+ FS RC+
Sbjct: 183 KGRLPVLTYLHNNKA-SICRCSQPLSGFSARCL 214
>BT003304-1|AAO25064.1| 761|Drosophila melanogaster GH09546p
protein.
Length = 761
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
+GRL L A S C CS L+ FS RC+
Sbjct: 255 KGRLPVLTYLHNNKA-SICRCSQPLSGFSARCL 286
>AF181629-1|AAD55415.1| 639|Drosophila melanogaster BcDNA.GH04637
protein.
Length = 639
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
+GRL L A S C CS L+ FS RC+
Sbjct: 133 KGRLPVLTYLHNNKA-SICRCSQPLSGFSARCL 164
>AE013599-3598|AAF46998.2| 761|Drosophila melanogaster CG3530-PA,
isoform A protein.
Length = 761
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
+GRL L A S C CS L+ FS RC+
Sbjct: 255 KGRLPVLTYLHNNKA-SICRCSQPLSGFSARCL 286
>AE013599-3597|AAF46997.2| 689|Drosophila melanogaster CG3530-PB,
isoform B protein.
Length = 689
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 215 RGRLRHLACTRGRSAPSCCTCSIRLNSFSIRCI 117
+GRL L A S C CS L+ FS RC+
Sbjct: 183 KGRLPVLTYLHNNKA-SICRCSQPLSGFSARCL 214
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 149 CYKCNRTGHFARECTQGGVGARDAG 223
C++C + GH A+ C + + + AG
Sbjct: 287 CHRCQQIGHTAKYCRKAHICVKCAG 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,579,140
Number of Sequences: 53049
Number of extensions: 177360
Number of successful extensions: 499
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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