Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_I01
         (228 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   1.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   2.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   3.1  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    21   4.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    21   7.0  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -1

Query: 81  FTIKILVNN---FTIVAMAGERETSTLP 7
           FTI +++N+   FT+   AG R   TLP
Sbjct: 216 FTIIVVLNSVTSFTVWRFAGLRRNMTLP 243


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 100 KPKRPMSAYLLWLNSARDKIKSEHPGLK 183
           KPK      LL LN+  D+IK   P LK
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLK 883


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 104  RSDRCLPTYYG 136
            + D+C P YYG
Sbjct: 968  KCDKCAPAYYG 978


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +2

Query: 101 NRSDRCLPTY 130
           N+S+RC+P+Y
Sbjct: 106 NKSNRCVPSY 115


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 219 PDLTCFLNYFCNF*SRMFRLNFIS 148
           P L C  N  CN+ SR  R  ++S
Sbjct: 858 PILACGQNNVCNYASRNDRTFWLS 881


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,161
Number of Sequences: 2352
Number of extensions: 2521
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 10158525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)