Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H20
(436 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 246 2e-65
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 246 2e-65
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 246 2e-65
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 100 2e-21
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 51 2e-06
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 51 2e-06
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 51 2e-06
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 51 2e-06
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 51 2e-06
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 51 2e-06
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 4.0
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.0
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.0
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.0
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 29 6.9
BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open readi... 29 9.1
BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein. 29 9.1
AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open read... 29 9.1
AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open read... 29 9.1
AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein. 29 9.1
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 246 bits (603), Expect = 2e-65
Identities = 116/134 (86%), Positives = 125/134 (93%)
Frame = +1
Query: 34 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 213
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 214 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 393
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 394 EVVKVANVSLLALY 435
+VVKVANVSLLALY
Sbjct: 121 KVVKVANVSLLALY 134
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 246 bits (603), Expect = 2e-65
Identities = 116/134 (86%), Positives = 125/134 (93%)
Frame = +1
Query: 34 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 213
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 214 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 393
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 394 EVVKVANVSLLALY 435
+VVKVANVSLLALY
Sbjct: 121 KVVKVANVSLLALY 134
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 246 bits (603), Expect = 2e-65
Identities = 116/134 (86%), Positives = 125/134 (93%)
Frame = +1
Query: 34 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 213
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 214 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 393
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 394 EVVKVANVSLLALY 435
+VVKVANVSLLALY
Sbjct: 121 KVVKVANVSLLALY 134
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 100 bits (239), Expect = 2e-21
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = +1
Query: 283 FVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRFEVVKVANVSLLALY 435
FVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF+VVKVANVSLLALY
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 51
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 50.8 bits (116), Expect = 2e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 142 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 321
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 322 NDEV*VAGFGRKGHAVGDIPGVRFEVVK 405
+ V V G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 165 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 43
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 165 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 43
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 165 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 43
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 165 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 43
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
Length = 1569
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = -3
Query: 398 TSNLTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVT 273
+SN TP SPT PL P AT TSS + +P R T AVT
Sbjct: 1240 SSNHTPA-SPTQTPLLP--ATLTSSKPTASSGEPPRPTTAVT 1278
>BX248133-9|CAM26111.1| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 389 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 210
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 209 ASTPTFS 189
AS FS
Sbjct: 287 ASIQAFS 293
>BA000025-13|BAB63304.1| 852|Homo sapiens G7C protein.
Length = 852
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 389 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 210
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 209 ASTPTFS 189
AS FS
Sbjct: 287 ASIQAFS 293
>AL662899-45|CAI18431.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 389 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 210
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 209 ASTPTFS 189
AS FS
Sbjct: 287 ASIQAFS 293
>AL662834-10|CAI17731.2| 891|Homo sapiens chromosome 6 open reading
frame 27 protein.
Length = 891
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 389 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 210
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 209 ASTPTFS 189
AS FS
Sbjct: 287 ASIQAFS 293
>AF134726-11|AAD21820.1| 852|Homo sapiens NG37 protein.
Length = 852
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = -3
Query: 389 LTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCL 210
LT G T P P +H F + P G N + P HL+ A+ L
Sbjct: 227 LTSGYFGTHPPKPPGKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALL 286
Query: 209 ASTPTFS 189
AS FS
Sbjct: 287 ASIQAFS 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,433,454
Number of Sequences: 237096
Number of extensions: 1604500
Number of successful extensions: 4421
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4404
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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