Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H18
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   1.8  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   2.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   5.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   9.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    20   9.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   9.5  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 4    RGTWLLKCPSLSQRPSVSDETALFYAGCRVPN 99
            RG W  +   + +RP +       + GCR  N
Sbjct: 981  RGFWHHRLAEIKRRPDLEYGKVWLFFGCRQRN 1012


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 161 FTGLPSVVSGLKISL 117
           + GLP+V+SGL  SL
Sbjct: 424 YNGLPTVMSGLDESL 438


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 32  DGHFNNHVPR 3
           DG+FN HV R
Sbjct: 76  DGNFNEHVSR 85


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 57  GRNCFVLRWLQGAK 98
           G  CF+  WL G++
Sbjct: 672 GSQCFINIWLLGSR 685


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 144 RRQPCEEWYASSTRSSRH 197
           R +PC +   S TR  RH
Sbjct: 4   RCEPCNKILTSLTRLRRH 21


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +3

Query: 162 EWYASSTRSSRHSDTPARYAFQT 230
           +W+  ST     + TPA +   T
Sbjct: 615 QWHTRSTEKRVSAGTPAAFNIST 637


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.127    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,309
Number of Sequences: 438
Number of extensions: 1528
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.4 bits)