Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H15
         (328 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.                  42   3e-04
CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.              42   3e-04
BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum p...    42   3e-04
BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum p...    42   3e-04
BC005245-1|AAH05245.1|  144|Homo sapiens chromosome 1 open readi...    28   7.7  
AF417114-1|AAQ03994.1|  144|Homo sapiens placental protein 25 va...    28   7.7  
AF416725-1|AAQ03618.1|  144|Homo sapiens placental protein 25 pr...    28   7.7  

>X94910-1|CAA64397.1|  261|Homo sapiens ERp28 protein.
          Length = 261

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +2

Query: 203 EVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELLIA 328
           +VI K    LVKFD  +PYG+K + F  LA+++   D+LL+A
Sbjct: 48  KVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVA 89


>CR541667-1|CAG46468.1|  261|Homo sapiens C12orf8 protein.
          Length = 261

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +2

Query: 203 EVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELLIA 328
           +VI K    LVKFD  +PYG+K + F  LA+++   D+LL+A
Sbjct: 48  KVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVA 89


>BC101495-1|AAI01496.1|  261|Homo sapiens endoplasmic reticulum
           protein 29 protein.
          Length = 261

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +2

Query: 203 EVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELLIA 328
           +VI K    LVKFD  +PYG+K + F  LA+++   D+LL+A
Sbjct: 48  KVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVA 89


>BC101493-1|AAI01494.1|  261|Homo sapiens endoplasmic reticulum
           protein 29, isoform 1 precursor protein.
          Length = 261

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = +2

Query: 203 EVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELLIA 328
           +VI K    LVKFD  +PYG+K + F  LA+++   D+LL+A
Sbjct: 48  KVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVA 89


>BC005245-1|AAH05245.1|  144|Homo sapiens chromosome 1 open reading
           frame 41 protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 284 PRRLHVCLHTGTQRRI*QVLHQIY**LQLKDNSSNSTEPLDVEAW 150
           P+   +C H     RI +++ Q Y    LK   S S EP+D E W
Sbjct: 46  PQEFIICFHKHV--RIERLVIQSYFVQTLKIEKSTSKEPVDFEQW 88


>AF417114-1|AAQ03994.1|  144|Homo sapiens placental protein 25
           variant protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 284 PRRLHVCLHTGTQRRI*QVLHQIY**LQLKDNSSNSTEPLDVEAW 150
           P+   +C H     RI +++ Q Y    LK   S S EP+D E W
Sbjct: 46  PQEFIICFHKHV--RIERLVIQSYFVQTLKIEKSTSKEPVDFEQW 88


>AF416725-1|AAQ03618.1|  144|Homo sapiens placental protein 25
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 284 PRRLHVCLHTGTQRRI*QVLHQIY**LQLKDNSSNSTEPLDVEAW 150
           P+   +C H     RI +++ Q Y    LK   S S EP+D E W
Sbjct: 46  PQEFIICFHKHV--RIERLVIQSYFVQTLKIEKSTSKEPVDFEQW 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,291,615
Number of Sequences: 237096
Number of extensions: 724182
Number of successful extensions: 1317
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)