Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H15
         (328 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   2.9  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   3.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   3.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.0  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   5.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   8.8  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   8.8  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 270 CLSPYGNATSNLTSAASNLLIT 205
           C  PY + T N+T     L  T
Sbjct: 232 CTEPYSDITFNITMRRKTLFYT 253


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 185 MNYLSTEVISKFDAALVKFDVAFPYGDKHEAFVALAKD 298
           +NYL T+    ++    K+D    Y  ++E  +  AK+
Sbjct: 87  VNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 185 MNYLSTEVISKFDAALVKFDVAFPYGDKHEAFVALAKD 298
           +NYL T+    ++    K+D    Y  ++E  +  AK+
Sbjct: 87  VNYLKTKRPKDWERLSAKYDSTGEYKKRYEHGLQFAKN 124


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 95  ISFCRDHRIILHFIVTCMRCNYVNFLKY 12
           +  CR    IL+FI  C++   +N   Y
Sbjct: 273 VGSCRKTDQILYFIRGCLQTYLINASTY 300


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 95  ISFCRDHRIILHFIVTCMRCNYVNFLKY 12
           +  CR    IL+FI  C++   +N   Y
Sbjct: 311 VGSCRKTDQILYFIRGCLQTYLINASTY 338


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 99  AVPFIIFVYIFSYSLNLP 152
           AV    FV+I++ SL+LP
Sbjct: 15  AVILASFVWIYALSLSLP 32


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 250 RNVEFNKCC 224
           RNVE+  CC
Sbjct: 188 RNVEYYSCC 196


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 232 KCCIKFTNNFS*KIIHLIPRNRSMLKLGKLRE*LKIYTKIING 104
           + CI  + N+   I  +I  N +     + R  + +Y +IING
Sbjct: 6   RICIVGSGNWGSTIAKIIGINAANFSNFEDRVTMYVYEEIING 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,238
Number of Sequences: 438
Number of extensions: 1546
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7217694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)