Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H14
         (420 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   2.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   9.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/46 (21%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 219 LSPQNRFSDFKKYSSTFD-NIQSLIKEGKVEEAPASECNETVNELT 353
           ++P    +  K +   F+ N +S++++ + E     +C+  ++ELT
Sbjct: 141 IAPTFHLNVLKSFIDLFNANARSVVEKMRKENGKEFDCHNYMSELT 186


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 60  KELTSPKSRLSLDLNNSQD 116
           KE+T P +  ++D+NN  +
Sbjct: 367 KEITVPSNEETIDINNGAE 385


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 152 RAVTEIFWSYVSILTVV 102
           RA      SYVS+LT+V
Sbjct: 117 RAYVSEMSSYVSVLTIV 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,990
Number of Sequences: 438
Number of extensions: 1920
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)