Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H13
         (250 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   0.33 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   0.57 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   1.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   1.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   1.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   4.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   5.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    19   7.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    19   9.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   9.3  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 0.33
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 92  ADFSIYLFTISFFFSVPSILAVYLY 166
           ADF +Y  +   FF +P ++ + +Y
Sbjct: 208 ADFPLYELSTIIFFLIPMLIILVVY 232


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 0.57
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 188 CIAVRLSF*GLGFYPRVGS 244
           CIA  L F G+ ++ +VGS
Sbjct: 318 CIATLLEFAGVHYFTKVGS 336


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 139 HRKKEADGK*VNRKIRAVLRTSLKN 65
           H + E+  K  NR+ R  LRT +++
Sbjct: 381 HEENESVDKHPNRRARGQLRTKIES 405


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 232 GIEPETSERQSHR 194
           GI+PE +E + HR
Sbjct: 195 GIDPELTESEQHR 207


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 232 GIEPETSERQSHR 194
           GI+PE +E + HR
Sbjct: 233 GIDPELTESEQHR 245


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.2 bits (40), Expect = 4.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 6   RRSRIVDPRAA*IRHEGHWQF 68
           RRSRIV P A  I +  +W F
Sbjct: 446 RRSRIVFPVAFIIFNILYWSF 466


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 31  GLLEFGTRVTGNFLMMFLKQRGFFDLPIYHQ 123
           GLLE   R  GN L  FL      +  + HQ
Sbjct: 154 GLLERAFRCLGNNLTAFLTTLDGVNDVVQHQ 184


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 131 FSVPSILAVYLYRL 172
           FS P+IL  Y+Y L
Sbjct: 89  FSSPTILISYIYIL 102


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 170 LPRWRSCIAVRLSF 211
           +PRWR+ I   L++
Sbjct: 83  VPRWRNGIPATLTY 96


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 187 LYCGATVVLRSRVLS 231
           + CGAT++ +  VL+
Sbjct: 186 MICGATIISKRYVLT 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,554
Number of Sequences: 438
Number of extensions: 1391
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)