Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H11
(373 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p pro... 204 3e-53
AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,... 204 3e-53
AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,... 204 3e-53
AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,... 204 3e-53
AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,... 204 3e-53
AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesp... 28 3.4
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 28 3.4
>AY060845-1|AAL28393.1| 186|Drosophila melanogaster GM02242p
protein.
Length = 186
Score = 204 bits (498), Expect = 3e-53
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLV 371
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLV 113
>AE014298-945|AAN09183.1| 186|Drosophila melanogaster CG3203-PD,
isoform D protein.
Length = 186
Score = 204 bits (498), Expect = 3e-53
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLV 371
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLV 113
>AE014298-944|AAF46194.1| 186|Drosophila melanogaster CG3203-PC,
isoform C protein.
Length = 186
Score = 204 bits (498), Expect = 3e-53
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLV 371
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLV 113
>AE014298-943|AAN09182.1| 186|Drosophila melanogaster CG3203-PB,
isoform B protein.
Length = 186
Score = 204 bits (498), Expect = 3e-53
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLV 371
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLV 113
>AE014298-942|AAF46195.1| 186|Drosophila melanogaster CG3203-PA,
isoform A protein.
Length = 186
Score = 204 bits (498), Expect = 3e-53
Identities = 94/113 (83%), Positives = 103/113 (91%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPF 212
MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+PF
Sbjct: 1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLV 371
RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+NAD KGLD DRLV
Sbjct: 61 RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLV 113
>AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesprin
splice variant protein.
Length = 400
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 90 SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 251
SNL VH ++ E +KLP A L N T + + RR G+ A A
Sbjct: 288 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 341
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 90 SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQA 251
SNL VH ++ E +KLP A L N T + + RR G+ A A
Sbjct: 7749 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 7802
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,600,093
Number of Sequences: 53049
Number of extensions: 398867
Number of successful extensions: 1119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -