BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H10
(372 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 112 4e-27
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 112 4e-27
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 112 4e-27
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 112 4e-27
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 25 0.91
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 2.1
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 2.8
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 2.8
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 4.9
AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein. 22 6.4
AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450 CY... 22 6.4
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 112 bits (270), Expect = 4e-27
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = +2
Query: 17 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 196
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTT 134
Query: 197 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 352
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 135 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 112 bits (270), Expect = 4e-27
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = +2
Query: 17 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 196
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTT 134
Query: 197 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 352
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 135 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 112 bits (270), Expect = 4e-27
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = +2
Query: 17 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 196
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTT 134
Query: 197 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 352
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 135 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 112 bits (270), Expect = 4e-27
Identities = 49/112 (43%), Positives = 73/112 (65%)
Frame = +2
Query: 17 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 196
VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTT 134
Query: 197 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 352
LRF G LN DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 135 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 0.91
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 81 SWSTMKPSMTSAAVTWILNARPTPTSIVLSARSYHRLPPLCVS 209
SWS + S S T S+ L A S +L P CVS
Sbjct: 37 SWSDCQASAQSVECTSASQMSIXGHSLFLPAESRQQLEPACVS 79
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 145 LHQPQSSYRPDRIIDYRLSAFRRRP 219
+++P R DR+ ++ L+ F RRP
Sbjct: 765 VYRPYCKGRADRLYEFYLNNFGRRP 789
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 81 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 197
+WS + P T+ WI T T + + ++ LPP
Sbjct: 205 TWSDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPP 244
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 81 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 197
+WS + P T+ WI T T + + ++ LPP
Sbjct: 206 TWSDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPP 245
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 81 SWSTMKPSM-TSAAVTWILNARPTPTSIVLSARSYHRLPP 197
+WS + P T+ WI T T + + ++ LPP
Sbjct: 206 TWSDLPPPPPTTTTTVWIDPTATTTTHVPPTTTTWSDLPP 245
>AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein.
Length = 99
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = +1
Query: 31 QLYPYNPHH--PGTLRLCF 81
QL PYNP H PG+ L +
Sbjct: 2 QLKPYNPEHKPPGSKDLVY 20
>AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450
CYPm3r5 protein.
Length = 519
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 139 PDLHQPQSSYRPDRIIDYRLSAFRRRP 219
PD++ ++Y PDR R++ RR P
Sbjct: 418 PDIYPEPATYDPDRFTPERMA--RRDP 442
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,663
Number of Sequences: 2352
Number of extensions: 8817
Number of successful extensions: 65
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28374390
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -