Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H09
         (231 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   2.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   2.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   2.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    20   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   9.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   9.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -2

Query: 206 ISRKYLMMIKSEYHEY 159
           +++KYL ++  +Y+E+
Sbjct: 596 VAQKYLRVVDPDYYEF 611


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -2

Query: 206 ISRKYLMMIKSEYHEY 159
           +++KYL ++  +Y+E+
Sbjct: 596 VAQKYLRVVDPDYYEF 611



 Score = 18.6 bits (36), Expect = 9.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 230  FFFPFLLFISRKYLMMIKSEY 168
            FF    LF+   +L+ +K +Y
Sbjct: 1272 FFMMNALFVLIVFLLTLKKDY 1292


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -2

Query: 206 ISRKYLMMIKSEYHEY 159
           +++KYL ++  +Y+E+
Sbjct: 596 VAQKYLRVVDPDYYEF 611


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -2

Query: 206 ISRKYLMMIKSEYHEY 159
           +++KYL ++  +Y+E+
Sbjct: 596 VAQKYLRVVDPDYYEF 611



 Score = 18.6 bits (36), Expect = 9.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 230  FFFPFLLFISRKYLMMIKSEY 168
            FF    LF+   +L+ +K +Y
Sbjct: 1272 FFMMNALFVLIVFLLTLKKDY 1292


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 138 ISLGCQMILMIFTL 179
           ISLGC ++ ++F L
Sbjct: 132 ISLGCLILAVVFLL 145


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 138 ISLGCQMILMIFTL 179
           ISLGC ++ ++F L
Sbjct: 132 ISLGCLILAVVFLL 145


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 138 ISLGCQMILMIFTL 179
           ISLGC ++ ++F L
Sbjct: 132 ISLGCLILAVVFLL 145


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 3.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 104 HEWSLVSFD 130
           H+W LV+FD
Sbjct: 302 HKWLLVNFD 310


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 129 IPNISLGCQMI 161
           +PN+ L C M+
Sbjct: 168 LPNVILACHML 178


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = -2

Query: 230 FFFPFLLFISRKYLMMIKSEYHEYHL 153
           F++ F+LF    +L+++   Y+ Y++
Sbjct: 241 FYYAFILF--TVHLLLLVCIYYFYYM 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,148
Number of Sequences: 336
Number of extensions: 493
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3213870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)