Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H09
(231 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 25 1.3
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 24 2.3
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 24 2.3
SPBC1A4.01 |apc10|SPBC1E8.06|anaphase-promoting complex subunit ... 23 4.1
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 23 5.4
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 23 5.4
SPBCPT2R1.03 |||hypothetical protein|Schizosaccharomyces pombe|c... 23 5.4
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 23 5.4
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 23 5.4
SPAC212.03 |||hypothetical protein|Schizosaccharomyces pombe|chr... 23 5.4
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 23 5.4
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 23 7.2
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.0 bits (52), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 45 ISSNCNANSESYSKLHSYSDTSGRSSHS 128
+SS + +S S S SY+ SG S+HS
Sbjct: 446 VSSGSSISSGSSSMSTSYTSASGSSAHS 473
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 24.2 bits (50), Expect = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 96 YSDTSGRSSHSIPNISLGCQMIL 164
YSD S H PN+S C+ ++
Sbjct: 396 YSDVSFPEYHGAPNVSSTCKSLI 418
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 24.2 bits (50), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 48 SSNCNANSESYSKLHSYSDTSGRSSHSIPNISLGCQMI 161
S+ +AN SYS S+SD + S+P++ G Q I
Sbjct: 158 SAPIDANINSYS---SFSDPASSYKPSLPSVPFGFQHI 192
>SPBC1A4.01 |apc10|SPBC1E8.06|anaphase-promoting complex subunit
Apc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 189
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 162 VSSDNLD*YSESNETSDHSCHYK 94
V DN+D Y +S+ + H+ H K
Sbjct: 46 VRDDNIDTYWQSDGSQPHTIHIK 68
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 23.0 bits (47), Expect = 5.4
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = -3
Query: 49 EMSRSAPAPNIGPQS 5
E+S+S+P+P++ P+S
Sbjct: 125 EISQSSPSPSLNPES 139
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 23.0 bits (47), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 48 SSNCNANSESYSKLHSYSDTSGRSSHSIP 134
+SN N +SK ++SD S + SIP
Sbjct: 195 NSNPRINVYRWSKTETFSDASSYITFSIP 223
>SPBCPT2R1.03 |||hypothetical protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 129
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 54 NCNANSESYSKLHSYSDT-SGRSSHSI 131
NC + + YS+L+ Y +T G+ ++I
Sbjct: 89 NCQSTGKWYSQLYDYQNTFIGKQEYNI 115
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 66 NSESYSKLHSYSDTSGRSSHS 128
NS S KLH+ + SG+ S S
Sbjct: 205 NSRSMQKLHNEAANSGKGSFS 225
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 23.0 bits (47), Expect = 5.4
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 48 SSNCNANSESYSKLHSYSDTSGRSSHSIP--NISL 146
S++ +A + S S ++SY+ +S S +IP NISL
Sbjct: 453 STSLSAVNISESVVYSYTSSSSMPSSAIPSFNISL 487
>SPAC212.03 |||hypothetical protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 129
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 54 NCNANSESYSKLHSYSDT-SGRSSHSI 131
NC + + YS+L+ Y +T G+ ++I
Sbjct: 89 NCQSTGKWYSQLYDYQNTFIGKQEYNI 115
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 23.0 bits (47), Expect = 5.4
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 42 LISSNCNANSESYSKLHSYSDTSGRS-SHSIPNISLGCQMI 161
L++S CN ++ S LHS+ S P + C+ +
Sbjct: 411 LLASTCNTKLDNLSCLHSFDGKQNFGLVQSFPKKEVYCESV 451
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 27 AGADLLISSNCNANSESYSKLHSYSD 104
AGA +I+ + NA+ E Y+K +D
Sbjct: 216 AGASRIIAIDINADKEVYAKKFGATD 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,381
Number of Sequences: 5004
Number of extensions: 8558
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 2,362,478
effective HSP length: 56
effective length of database: 2,082,254
effective search space used: 41645080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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