Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H09
         (231 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z86062-2|CAI19455.1|  766|Homo sapiens single-minded homolog 1 (...    29   2.0  
U70212-1|AAB62395.1|  766|Homo sapiens hSIM1 protein.                  29   2.0  
AL121948-1|CAI20423.1|  766|Homo sapiens single-minded homolog 1...    29   2.0  
BC018706-1|AAH18706.1|  480|Homo sapiens TNS4 protein protein.         29   2.7  
AK027856-1|BAB55413.1|  480|Homo sapiens protein ( Homo sapiens ...    29   2.7  
AF417488-1|AAN32666.1|  715|Homo sapiens C-terminal tensin-like ...    29   2.7  
AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens ...    29   3.5  

>Z86062-2|CAI19455.1|  766|Homo sapiens single-minded homolog 1
           (Drosophila) protein.
          Length = 766

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSH-----SIPNISLGC 152
           SD  P   AG    +S NC  +   Y   H+Y+ T     H     +I N SLGC
Sbjct: 680 SDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEHLYDSETIRNYSLGC 734


>U70212-1|AAB62395.1|  766|Homo sapiens hSIM1 protein.
          Length = 766

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSH-----SIPNISLGC 152
           SD  P   AG    +S NC  +   Y   H+Y+ T     H     +I N SLGC
Sbjct: 680 SDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEHLYDSETIRNYSLGC 734


>AL121948-1|CAI20423.1|  766|Homo sapiens single-minded homolog 1
           (Drosophila) protein.
          Length = 766

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSH-----SIPNISLGC 152
           SD  P   AG    +S NC  +   Y   H+Y+ T     H     +I N SLGC
Sbjct: 680 SDISPHQTAGDHPTVSPNCFGSHRQYFDKHAYTLTGYALEHLYDSETIRNYSLGC 734


>BC018706-1|AAH18706.1|  480|Homo sapiens TNS4 protein protein.
          Length = 480

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSHSIPNISL 146
           SD   +FG+   LL SSN +  S S S L S +++S  S HS+ ++SL
Sbjct: 45  SDVSYMFGSSQSLLHSSNSSHQSSSRS-LESPANSSS-SLHSLGSVSL 90


>AK027856-1|BAB55413.1|  480|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14950 fis, clone PLACE2000371, weakly similar to
           TENSIN. ).
          Length = 480

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSHSIPNISL 146
           SD   +FG+   LL SSN +  S S S L S +++S  S HS+ ++SL
Sbjct: 45  SDVSYMFGSSQSLLHSSNSSHQSSSRS-LESPANSSS-SLHSLGSVSL 90


>AF417488-1|AAN32666.1|  715|Homo sapiens C-terminal tensin-like
           protein protein.
          Length = 715

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/48 (41%), Positives = 29/48 (60%)
 Frame = +3

Query: 3   SDCGPIFGAGADLLISSNCNANSESYSKLHSYSDTSGRSSHSIPNISL 146
           SD   +FG+   LL SSN +  S S S L S +++S  S HS+ ++SL
Sbjct: 280 SDVSYMFGSSQSLLHSSNSSHQSSSRS-LESPANSSS-SLHSLGSVSL 325


>AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35331 fis, clone PROST2014659. ).
          Length = 577

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 39  LLISSNCNANSESYSKLHSYSDTSGRSSHSIPNISLGCQMILMIFTLNHH 188
           LL+SS C+++     +LH     S   S S PN +   + IL++ +  ++
Sbjct: 44  LLVSSRCSSSPPGAPRLHRMLLVSAGCSSSSPNTTPPLRQILILLSARYY 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,066,135
Number of Sequences: 237096
Number of extensions: 287696
Number of successful extensions: 636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 76,859,062
effective HSP length: 55
effective length of database: 63,818,782
effective search space used: 1340194422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)