Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H07
(461 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 259 2e-68
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 227 9e-59
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 152 4e-36
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 150 1e-35
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 149 3e-35
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 128 4e-29
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 93 3e-18
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 83 4e-15
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 82 7e-15
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 74 1e-12
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 63 3e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 62 8e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 58 9e-08
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 57 2e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 56 5e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 56 5e-07
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 55 7e-07
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 55 7e-07
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 53 3e-06
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 51 1e-05
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 50 2e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 48 7e-05
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 48 1e-04
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 45 7e-04
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 44 0.001
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 44 0.002
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 44 0.002
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 43 0.004
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 42 0.005
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.011
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 41 0.011
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 41 0.015
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 41 0.015
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 40 0.020
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 40 0.026
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 36 0.56
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 35 0.75
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 0.99
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 34 1.3
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 34 1.3
UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB... 33 2.3
UniRef50_Q5W6S1 Cluster: Putative uncharacterized protein B1036C... 33 3.0
UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sati... 33 4.0
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 33 4.0
UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.0
UniRef50_Q1ASM8 Cluster: Sulfotransferase-like protein; n=1; Rub... 32 5.3
UniRef50_Q8SAB5 Cluster: DNA binding protein; n=1; Elaeis oleife... 32 5.3
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 32 5.3
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 7.0
UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing p... 32 7.0
UniRef50_UPI00003C0391 Cluster: PREDICTED: similar to scratch CG... 31 9.2
UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3; C... 31 9.2
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 31 9.2
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 31 9.2
UniRef50_Q2QUI1 Cluster: Putative uncharacterized protein; n=2; ... 31 9.2
UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 259 bits (634), Expect = 2e-68
Identities = 123/143 (86%), Positives = 131/143 (91%)
Frame = +1
Query: 31 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 210
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 211 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 390
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 391 AVVHVANVSLLALYKEKKERPRS 459
VV VANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 227 bits (555), Expect = 9e-59
Identities = 105/142 (73%), Positives = 123/142 (86%)
Frame = +1
Query: 34 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 213
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 214 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRFA 393
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ENDEV +AGFGRKG A GDIPGVRF
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 394 VVHVANVSLLALYKEKKERPRS 459
VV V+ VSLLAL+KEKKE+PRS
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 152 bits (368), Expect = 4e-36
Identities = 72/109 (66%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +1
Query: 7 GDRVRAIVMG-KPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIV 183
G+RVRA G K G+ RK HRR QRWADK +KK+H G WK PF G+SHAKGIV
Sbjct: 63 GERVRAWSCGAKTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIV 121
Query: 184 LEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV 330
LEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 122 LEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 150 bits (364), Expect = 1e-35
Identities = 73/132 (55%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Frame = +1
Query: 61 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 240
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 241 RVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGF-GRKGHAVGDIPGVRFAVVHVANVS 417
R+QLIKNG+++TAF P DG +N I+E+DEV + G GR G + GDIPGVRF V V +VS
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVS 128
Query: 418 LLALYKEKKERP 453
L + K+++P
Sbjct: 129 LEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 149 bits (361), Expect = 3e-35
Identities = 74/139 (53%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
Frame = +1
Query: 40 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 219
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 220 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGF-GRKGHAVGDIPGVRFAV 396
+A+RKCVRVQL+KNGK VTAFVP DG LN+I E+DEV + G +G ++GDIPGVRF V
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKV 126
Query: 397 VHVANVSLLALYKEKKERP 453
+ V VSL A+++ KK++P
Sbjct: 127 IKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 128 bits (310), Expect = 4e-29
Identities = 62/98 (63%), Positives = 72/98 (73%)
Frame = -1
Query: 461 YDLGLSFFSLYRARSDTFAT*TTANLTPGMSPTAWPLRPNPATHTSSFSSMWLRQPSRGT 282
YDLG SFFS ++A +T T TT NLTPG+SP A PL P PA TSSFSS +QPS GT
Sbjct: 5 YDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSFGT 64
Query: 281 NAVTFLPFLMSCTRTHLRMAEFGCLASTPTFSRTMPLA 168
AVTFLPFL++ T TH +AEFGCL S P FS+T+PLA
Sbjct: 65 KAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 93.1 bits (221), Expect = 3e-18
Identities = 53/139 (38%), Positives = 78/139 (56%)
Frame = -3
Query: 447 LLLFLVQS*KRHVCYVNHRKSDSRNVTNSVAFTTESCHSHLIVLLNVVEATITRHECCHF 268
L F +QS +R++ Y NH K DSR++T S+ F+T+S + +I+ LN V+A I HE C
Sbjct: 4 LAQFDLQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDL 62
Query: 267 LAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSL 88
L VLNEL+ + L +G I L G N FF+ ++L MR + + L VGF V P L
Sbjct: 63 LPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLL 122
Query: 87 LATMIHVLARRANTPRFTH 31
+ ++ L + T H
Sbjct: 123 VPSVTAELPGSSETTTLAH 141
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 82.6 bits (195), Expect = 4e-15
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 235 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGF-GRKGHAVGDIPGVRFAVVHVAN 411
CVRVQL KNGK VTAFVP DG LN I E+DEV + G +G A GD+PGVRF V V
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 412 VSLLALYKEKKERP 453
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +1
Query: 40 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 219
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 220 SAIRKCVRVQLIKN 261
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 81.8 bits (193), Expect = 7e-15
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +1
Query: 322 DEV*VAGFGRKGHAVGDIPGVRFAVVHVANVSLLALYKEKKERPRS 459
DEV +AGFGRKGHAVGDIPGVRF VV V+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/114 (35%), Positives = 60/114 (52%)
Frame = -3
Query: 360 VAFTTESCHSHLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFED 181
+ F+T+S + + I+ LN V+A I HE C L VLNEL+ + L +G I L G N FF+
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 180 DALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHYDSA 19
++L MR T + + L VGF V P L+ ++ L + T H A
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGA 114
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 62.9 bits (146), Expect = 3e-09
Identities = 36/103 (34%), Positives = 64/103 (62%)
Frame = -3
Query: 384 DSRNVTNSVAFTTESCHSHLIVLLNVVEATITRHECCHFLAVLNELYTNTLTNG*IRLLG 205
D+R++++SV+ ++E + +V+ + T++ +E HFL VL EL+++ L+NG + LLG
Sbjct: 37 DTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSHFLVVLFELHSDALSNGCVWLLG 96
Query: 204 FNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATM 76
F+ + F DDA +E + L SR H F + PSLL+++
Sbjct: 97 FDCDLFYDDACCAWSNSEWLILGSR-HC-FNVSCIVPSLLSSV 137
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 61.7 bits (143), Expect = 8e-09
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +1
Query: 133 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 312
R NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G +++
Sbjct: 79 RKSKNPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNL 135
Query: 313 EENDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+E++ V + GR D+PGV+ V
Sbjct: 136 QEHNIV-LCRVGR----CRDVPGVKIKCV 159
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 58.0 bits (134), Expect = 9e-08
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +1
Query: 121 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 300
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 301 LNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVV 399
++++E++ V + GR + D PGV+ V
Sbjct: 70 GHNLQEHNVV-LVRVGR----LKDCPGVKLKCV 97
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 56.8 bits (131), Expect = 2e-07
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +1
Query: 148 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 327
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 328 V*VAGFGRKGHAVGDIPGVRFAVV 399
V V G GR D+PGV+ +V
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIV 137
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 55.6 bits (128), Expect = 5e-07
Identities = 32/79 (40%), Positives = 54/79 (68%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ V V G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 352 KGHAVGDIPGVRFAVVHVA 408
V D+PGV++ +V A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 55.6 bits (128), Expect = 5e-07
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G ++++E
Sbjct: 20 KAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQE 76
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVVHVA 408
+ V V G GR V D+PGVR+ ++ A
Sbjct: 77 HSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 55.2 bits (127), Expect = 7e-07
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +1
Query: 121 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 300
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 301 LNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVV 399
++++E++ V + GR + D+PGV+ V
Sbjct: 113 GHNLQEHNIV-LCRVGR----LQDVPGVKLKAV 140
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 55.2 bits (127), Expect = 7e-07
Identities = 35/93 (37%), Positives = 56/93 (60%)
Frame = +1
Query: 121 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 300
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 301 LNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVV 399
++++E++ V + GR + D+PGV+ V
Sbjct: 99 GHNLQEHNIV-LCRVGR----LQDVPGVKLKAV 126
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 52.8 bits (121), Expect = 3e-06
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +1
Query: 121 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 300
H+ R P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 301 LNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVV 399
++++E++ V + GR V D PGV+ V
Sbjct: 117 GHNLQEHNIV-LCRVGR----VQDCPGVKIKCV 144
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 51.2 bits (117), Expect = 1e-05
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G K + + + ++PNSA+RK RV+L NG+ TA++P +G ++++E+ V V
Sbjct: 77 GCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLV 133
Query: 337 AGFGRKGHAVGDIPGVRFAVV 399
G G K D+PGVR+ +V
Sbjct: 134 RGGGAK-----DLPGVRYKIV 149
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 50.4 bits (115), Expect = 2e-05
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 48.4 bits (110), Expect = 7e-05
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
+GI L V K+PNSA+RK RV+L G +VTA++P G ++++E+ V V G GR
Sbjct: 31 RGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR 86
Query: 352 KGHAVGDIPGVRFAVV 399
V D+PGVR+ +V
Sbjct: 87 ----VKDLPGVRYHIV 98
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +V V
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 337 AGFGRK 354
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 47.6 bits (108), Expect = 1e-04
Identities = 32/79 (40%), Positives = 49/79 (62%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 352 KGHAVGDIPGVRFAVVHVA 408
D+PGV++ V+ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 45.2 bits (102), Expect = 7e-04
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 322 DEV*VAGFGRKGHAVGDIPGVRFAVV 399
DEV ++GFG KGHAVGDI GVRF VV
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVV 92
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 44.4 bits (100), Expect = 0.001
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ V +
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 337 AGFGRKGHAVGDIPGVRFAVV 399
G GR D PGV++ VV
Sbjct: 104 RG-GR----AQDCPGVQYHVV 119
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 43.6 bits (98), Expect = 0.002
Identities = 31/87 (35%), Positives = 49/87 (56%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+D V V +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/76 (31%), Positives = 50/76 (65%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
KG+ ++ K+PNSA+RK +++L KN K++ A++P +G + +++++ V + +
Sbjct: 29 KGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----K 81
Query: 352 KGHAVGDIPGVRFAVV 399
KG V D+PG+++ V+
Sbjct: 82 KGR-VQDLPGIKYKVI 96
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 42.7 bits (96), Expect = 0.004
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 190 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAV 366
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ V V G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 367 GDIPGVRFAVVHVA 408
D PGVR+ +V A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 42.3 bits (95), Expect = 0.005
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G KG+ L+ + K+PNS RK R++L NG VT ++P +G ++I+++ V +
Sbjct: 105 GRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPGEG--HNIQQHSVVLI 161
Query: 337 AGFGRKGHAVGDIPGVRF 390
G GR D PGVR+
Sbjct: 162 RG-GR----AQDCPGVRY 174
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 41.1 bits (92), Expect = 0.011
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 352 KGHAVGDIPGVRFAVV 399
V D PG+++ ++
Sbjct: 92 ----VQDCPGIKYKII 103
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 41.1 bits (92), Expect = 0.011
Identities = 33/95 (34%), Positives = 50/95 (52%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
KGI ++ K+PNSA RK +V L NGK + ++ +G + ++E+ V V G GR
Sbjct: 31 KGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVRG-GR 86
Query: 352 KGHAVGDIPGVRFAVVHVANVSLLALYKEKKERPR 456
V D+PGV++ V L A+ KK R +
Sbjct: 87 ----VKDLPGVQYHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 40.7 bits (91), Expect = 0.015
Identities = 36/115 (31%), Positives = 57/115 (49%)
Frame = +1
Query: 46 GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 225
G T + + H RE++ H R +A G +G+ L K+PNSA
Sbjct: 63 GFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTRTPKKPNSA 111
Query: 226 IRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 390
+ K +V+L N V A++P +G ++++E+ V V G GR V D+PGV+F
Sbjct: 112 LGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGVKF 158
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 40.7 bits (91), Expect = 0.015
Identities = 26/81 (32%), Positives = 47/81 (58%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E V V
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 337 AGFGRKGHAVGDIPGVRFAVV 399
+G GR D+PGVR+ ++
Sbjct: 83 SG-GR----APDLPGVRYTLI 98
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 40.3 bits (90), Expect = 0.020
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 208 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVR 387
K+PNSA+RK ++ L N K V A+VP + + I +N V + KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 388 FAVV 399
+ V+
Sbjct: 94 YKVI 97
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 39.9 bits (89), Expect = 0.026
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +1
Query: 175 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRK 354
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ V + G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 355 GHAVGDIPGVRF 390
V D+PGV+F
Sbjct: 87 ---VKDLPGVKF 95
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 35.5 bits (78), Expect = 0.56
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + V + G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 352 KGHAVGDIPGVRFAVV 399
+ D+PGV +V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 35.1 bits (77), Expect = 0.75
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +1
Query: 157 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*V 336
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + V V
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 337 AGFGRKGHAVGDIPGVRFAVV 399
G GR D+ G + VV
Sbjct: 184 RG-GR----CQDVSGCHYKVV 199
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.7 bits (76), Expect = 0.99
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 253 IKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVVHVANVSLLALY 432
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 433 KEKKERPRS 459
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 34.3 bits (75), Expect = 1.3
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 208 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVR 387
K+PNSA+RK +V+L N V +P +G ++++E+ + G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 388 FAVVHVANVSLLALYKEKKERPR 456
+ V + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 34.3 bits (75), Expect = 1.3
Identities = 25/64 (39%), Positives = 40/64 (62%)
Frame = +1
Query: 208 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVR 387
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ V V G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 388 FAVV 399
+ +V
Sbjct: 228 YHIV 231
>UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB;
n=1; marine gamma proteobacterium HTCC2080|Rep: Putative
Mg2+ and Co2+ transporter CorB - marine gamma
proteobacterium HTCC2080
Length = 397
Score = 33.5 bits (73), Expect = 2.3
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -3
Query: 240 NTLTNG*IRLLGFNANFFEDDALSMR-----CTTEGVRLPSR 130
N++TNG ++L+GF + D+ALS T G R+PSR
Sbjct: 118 NSVTNGLLKLMGFRPDLQNDEALSQEELRTIVTESGTRIPSR 159
>UniRef50_Q5W6S1 Cluster: Putative uncharacterized protein
B1036C05.10; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
B1036C05.10 - Oryza sativa subsp. japonica (Rice)
Length = 300
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 436 PCTELEATRLLREPPQI*LQECHQQRGLYDRILPLTPHRSPQCG*GN--HHAAR 281
P L A +LR P LQ+ ++RG R LP+ P R PQ G G HH R
Sbjct: 10 PGRALRAAAVLRRP----LQQVPRRRGRRPRRLPVRPARRPQHGVGRRAHHGGR 59
>UniRef50_Q6K6D7 Cluster: Cell wall protein-like; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Cell wall protein-like -
Oryza sativa subsp. japonica (Rice)
Length = 398
Score = 32.7 bits (71), Expect = 4.0
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -1
Query: 449 LSFFSLYR-ARSDTFAT*TTANLTPGMSPTAW-PLRPNPA 336
++F SL+R AR+ T +T+ +T SP+A PLRPNPA
Sbjct: 187 VAFGSLFRRARAPADVTISTSGITAARSPSASPPLRPNPA 226
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.7 bits (71), Expect = 4.0
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 64 KHVNHRREQ--RWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 237
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 238 VRVQLIK 258
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_Q2GQC4 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 507
Score = 32.7 bits (71), Expect = 4.0
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 106 EFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 285
+F+ G W N F A G + E + E K+PN++ + + + + +G TAF
Sbjct: 231 DFRTFKQGLLWGGNVFYFADKFPGQI-ESLVNELKKPNASDQTHIMISIGHSGAMATAFG 289
Query: 286 PRDGCLNHIEENDEV 330
CLN N+ V
Sbjct: 290 APIMCLNQAYYNEPV 304
>UniRef50_Q1ASM8 Cluster: Sulfotransferase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Sulfotransferase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 308
Score = 32.3 bits (70), Expect = 5.3
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 355 GHAVGDIPGVRFAVVHVANVSLLALYK--EKKERPRS 459
G+AVG IPGV VVH+ A Y +KKE+P S
Sbjct: 143 GYAVGMIPGVDLRVVHLVRDPRAAAYSWLKKKEQPDS 179
>UniRef50_Q8SAB5 Cluster: DNA binding protein; n=1; Elaeis
oleifera|Rep: DNA binding protein - Elaeis oleifera (Oil
palm)
Length = 460
Score = 32.3 bits (70), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 382 LQECHQQRGLYDRILPLTPHRS 317
LQ H + G Y RILP+ PHR+
Sbjct: 413 LQSFHSEEGAYKRILPMEPHRN 434
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 32.3 bits (70), Expect = 5.3
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
+G VL+ V K+PNSA R + +L N K V A +P G +++ ++ + V G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 352 KGHAVGDIPGVRFAVV 399
+ D+PGVR +
Sbjct: 88 R-----DLPGVRHTCI 98
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 61 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 213
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing
protein 9C; n=19; Murinae|Rep: NACHT, LRR and PYD
domains-containing protein 9C - Mus musculus (Mouse)
Length = 1004
Score = 31.9 bits (69), Expect = 7.0
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -3
Query: 309 VVEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSR 130
V+E+ + + C F+A LY L+N + LL +NF ED +++ C E ++ P+
Sbjct: 779 VLESLMLSYCCLTFIAC-GHLYEALLSNKHLSLLDLGSNFLEDIGVNLLC--EALKYPNC 835
Query: 129 T 127
T
Sbjct: 836 T 836
>UniRef50_UPI00003C0391 Cluster: PREDICTED: similar to scratch
CG1130-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to scratch CG1130-PA - Apis mellifera
Length = 615
Score = 31.5 bits (68), Expect = 9.2
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 460 MTWASPSFPCTELEATRLLREPPQI*LQECHQQRGLYDRILPLTPHRS 317
+T+++PS PC + AT ++PPQ Q+ HQ + PLTP S
Sbjct: 347 LTYSTPSIPCAPIVAT---QQPPQQLAQQSHQ---TIEAAPPLTPPTS 388
>UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3;
Corynebacterineae|Rep: Queuine tRNA-ribosyltransferase -
Corynebacterium jeikeium (strain K411)
Length = 482
Score = 31.5 bits (68), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 42 SGYSHGAQARESSSRAAMGRQGIQKSPHG 128
+G G AR + S A+GR G+ K+PHG
Sbjct: 63 AGAGAGGSARLNGSAGALGRTGVIKTPHG 91
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 31.5 bits (68), Expect = 9.2
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
K I L+ + + K+PNSA R+ +V+ +K +T +P G ++++++ V + G GR
Sbjct: 32 KVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GR 88
Query: 352 KGHAVG 369
+G
Sbjct: 89 SKDLIG 94
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 31.5 bits (68), Expect = 9.2
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = +1
Query: 172 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGR 351
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ V V G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 352 KGHAVGDIPGVR 387
V D PG R
Sbjct: 119 ----VKDSPGKR 126
>UniRef50_Q2QUI1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 283
Score = 31.5 bits (68), Expect = 9.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 6 RRSCSRYRNG*TSGYSHGAQARESSSRAAMGRQGIQKSP 122
+R+C R +G +GY HG + + SSR + R G+ +P
Sbjct: 183 KRACYRV-HGMATGYCHGCRCQRCSSRPSRDRDGVAWAP 220
>UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 76
Score = 31.5 bits (68), Expect = 9.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 82 REQRWADKEFKKAHMGTRWKANPFGG 159
RE+R ++ K H G+RW A+ +GG
Sbjct: 48 REKRSGSTQYWKVHTGSRWSASTYGG 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,814,154
Number of Sequences: 1657284
Number of extensions: 10962804
Number of successful extensions: 29916
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 28884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29869
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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