Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H07
(461 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 259 4e-69
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 259 4e-69
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 259 4e-69
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 111 1e-24
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 50 3e-06
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 50 3e-06
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 50 3e-06
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 50 3e-06
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 4.5
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.5
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.5
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 4.5
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 259 bits (634), Expect = 4e-69
Identities = 123/143 (86%), Positives = 131/143 (91%)
Frame = +1
Query: 31 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 210
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 211 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 390
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 391 AVVHVANVSLLALYKEKKERPRS 459
VV VANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 259 bits (634), Expect = 4e-69
Identities = 123/143 (86%), Positives = 131/143 (91%)
Frame = +1
Query: 31 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 210
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 211 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 390
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 391 AVVHVANVSLLALYKEKKERPRS 459
VV VANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 259 bits (634), Expect = 4e-69
Identities = 123/143 (86%), Positives = 131/143 (91%)
Frame = +1
Query: 31 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 210
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 211 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRF 390
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 391 AVVHVANVSLLALYKEKKERPRS 459
VV VANVSLLALYK KKERPRS
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 111 bits (266), Expect = 1e-24
Identities = 53/59 (89%), Positives = 53/59 (89%)
Frame = +1
Query: 280 FVPRDGCLNHIEENDEV*VAGFGRKGHAVGDIPGVRFAVVHVANVSLLALYKEKKERPR 456
FVP DGCLN IEENDEV VAGFGRKGHAVGDIPGVRF VV VANVSLLALYK KKERPR
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPR 59
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +1
Query: 139 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 318
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 319 NDEV*VAGFGRKGHAVGDIPGVRFAVV 399
+ V V G GR D+PGV+ VV
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVV 126
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 162 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 40
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 162 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 40
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 162 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 40
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 162 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 40
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,973,607
Number of Sequences: 237096
Number of extensions: 1764553
Number of successful extensions: 4407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4390
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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