BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H06
(154 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 0.73
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 1.3
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 22 2.2
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 20 9.1
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 20 9.1
AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 20 9.1
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 0.73
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 74 CAFIK*YIYCLVNIMEDFEKVI 139
C+FI YI C ++I ++ +K++
Sbjct: 134 CSFIFLYILCTMSIRQNIQKML 155
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 23.0 bits (47), Expect = 1.3
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 90 DIYIV*LILWKISRK 134
D+Y + L+LW+I+R+
Sbjct: 254 DVYALGLVLWEIARR 268
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 22.2 bits (45), Expect = 2.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 63 QCLIVPLSNDIYIV*LILWKISRK 134
+C DIY + LI W++ R+
Sbjct: 337 ECFDALRKADIYAIGLIFWEVCRR 360
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 20.2 bits (40), Expect = 9.1
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = +3
Query: 90 DIYIV*LILWKISRK 134
D+Y + L+LW+++ +
Sbjct: 448 DVYTLALVLWELANR 462
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 20.2 bits (40), Expect = 9.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +3
Query: 90 DIYIV*LILWKISRK 134
D+Y V L+ W+++R+
Sbjct: 454 DMYSVGLVFWEMARR 468
>AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein.
Length = 471
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 69 GTVLRRQDVITIYNLLYSN 13
GTV+ R +T+Y +YS+
Sbjct: 360 GTVISRVISLTVYASVYSH 378
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,808
Number of Sequences: 2352
Number of extensions: 2088
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 30
effective length of database: 493,419
effective search space used: 9868380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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