Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H06
(154 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 0.46
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 0.46
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 0.46
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 0.46
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 0.46
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 0.46
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 1.4
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 1.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 1.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 1.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 2.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 19 7.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 7.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 18 9.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.9
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 18 9.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 18 9.9
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 91 YNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 0.46
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ +++NIN
Sbjct: 313 YNNYNNNYKPLYYNIN 328
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 1.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N++ + +NIN
Sbjct: 324 YNNYNNNYKPLHYNIN 339
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N+ ++++NIN
Sbjct: 96 YNNNNNYNKKLYYNIN 111
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N+ ++++NIN
Sbjct: 96 YNNDNNYNKKLYYNIN 111
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 154 YNNIANHFLEIFHNIN 107
YNN N+ ++++NIN
Sbjct: 334 YNNNNNYNKKLYYNIN 349
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -1
Query: 154 YNNIANHFLEIFHNI 110
YNN N++ +++NI
Sbjct: 324 YNNYNNNYKPLYYNI 338
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 18.6 bits (36), Expect = 7.5
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -1
Query: 148 NIANHFLEIFHN 113
+I NH+L ++H+
Sbjct: 106 SIPNHYLWLYHD 117
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 18.6 bits (36), Expect = 7.5
Identities = 8/32 (25%), Positives = 14/32 (43%)
Frame = +1
Query: 31 VYCDNVLTS*HSALLCLYQMIYILFS*YYGRF 126
V C N ++ L Y ++++ YY F
Sbjct: 195 VVCQNFFYQIYATLGSFYIPLFVMIQVYYKIF 226
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 18.2 bits (35), Expect = 9.9
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 98 YCLVNIM 118
YCLVNI+
Sbjct: 325 YCLVNIV 331
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.9
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -3
Query: 59 YDVKTLSQYTIYY 21
Y+V +++ T+YY
Sbjct: 125 YEVTLMTKATVYY 137
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 18.2 bits (35), Expect = 9.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +2
Query: 20 YNKLYIVITS*RRNTVPYCA 79
+++L+++ + TVP CA
Sbjct: 133 FDRLWVLDSGLVNRTVPVCA 152
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 18.2 bits (35), Expect = 9.9
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 88 FDKGTIRHCVTTSR 47
+D+GT+R V R
Sbjct: 469 YDEGTVRRRVAVDR 482
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,547
Number of Sequences: 438
Number of extensions: 626
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used: 2664060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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