Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H05
(412 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 247 5e-66
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 247 5e-66
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 247 5e-66
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 36 0.021
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB... 29 2.4
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA... 29 2.4
BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p pro... 29 3.2
AY051772-1|AAK93196.1| 673|Drosophila melanogaster LD29879p pro... 29 3.2
AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA... 29 3.2
AE013599-3917|AAF47240.1| 673|Drosophila melanogaster CG4707-PA... 29 3.2
AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p pro... 28 5.5
AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-P... 28 5.5
X95636-1|CAA64892.1| 431|Drosophila melanogaster S-adenosyl-L-h... 27 7.3
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 247 bits (604), Expect = 5e-66
Identities = 114/132 (86%), Positives = 123/132 (93%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSSKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVS K++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVI 409
AHSIQIIKV+ I
Sbjct: 121 AHSIQIIKVDSI 132
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 247 bits (604), Expect = 5e-66
Identities = 114/132 (86%), Positives = 123/132 (93%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSSKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVS K++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVI 409
AHSIQIIKV+ I
Sbjct: 121 AHSIQIIKVDSI 132
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 247 bits (604), Expect = 5e-66
Identities = 114/132 (86%), Positives = 123/132 (93%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 193
M+AKG LKEYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 194 IVSSKEIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 373
IVS K++ E SPVKIKNFGIWLRY+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRAR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRAR 120
Query: 374 AHSIQIIKVEVI 409
AHSIQIIKV+ I
Sbjct: 121 AHSIQIIKVDSI 132
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 14 MKAKGELKEYEVIGRKLP 67
M+AKG LKEYEV+GRKLP
Sbjct: 1 MRAKGLLKEYEVVGRKLP 18
>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
isoform B protein.
Length = 4685
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 277 RARLVTQPDTKVLNLNRTLFWNFLAGYNFTSSLFELLQLPQEIPE 143
R RL+ +TK+L LNR L NF +N+ S F+L + E
Sbjct: 903 RLRLLQCDETKML-LNRLLIANFCLFFNYESQEFQLYSRDLSVQE 946
>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
isoform A protein.
Length = 4543
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 277 RARLVTQPDTKVLNLNRTLFWNFLAGYNFTSSLFELLQLPQEIPE 143
R RL+ +TK+L LNR L NF +N+ S F+L + E
Sbjct: 858 RLRLLQCDETKML-LNRLLIANFCLFFNYESQEFQLYSRDLSVQE 901
>BT015977-1|AAV36862.1| 527|Drosophila melanogaster RE70280p
protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 104 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSSKEIPEKSPV 232
RI PI + S +++ L LKK EI S P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AY051772-1|AAK93196.1| 673|Drosophila melanogaster LD29879p
protein.
Length = 673
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 56 RKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSSKEIPEKSPVK 235
+K+P+E + K L M P+ + + LR KK S K P+ PV+
Sbjct: 463 KKIPTERKLKEHLRYMH--DPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQ 520
Query: 236 IKNFGIWLRYES 271
+ G WLR+ S
Sbjct: 521 CEICGTWLRHLS 532
>AE014297-1246|AAF54594.1| 527|Drosophila melanogaster CG6653-PA
protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 104 RIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSSKEIPEKSPV 232
RI PI + S +++ L LKK EI S P K PV
Sbjct: 26 RILGVFPIPSHSHYYHALPYLKKLASLGHEITSVSPFPLKEPV 68
>AE013599-3917|AAF47240.1| 673|Drosophila melanogaster CG4707-PA
protein.
Length = 673
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 56 RKLPSESEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSSKEIPEKSPVK 235
+K+P+E + K L M P+ + + LR KK S K P+ PV+
Sbjct: 463 KKIPTERKLKEHLRYMH--DPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQ 520
Query: 236 IKNFGIWLRYES 271
+ G WLR+ S
Sbjct: 521 CEICGTWLRHLS 532
>AY102668-1|AAM27497.1| 432|Drosophila melanogaster GM02466p
protein.
Length = 432
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
+ EK P +KN L E+ +GVHN+Y+ +++ +G
Sbjct: 139 VHEKFPQYLKNIK-GLSEETTTGVHNLYKMFKEGRLG 174
>AE014298-2148|AAF48453.1| 432|Drosophila melanogaster CG11654-PA
protein.
Length = 432
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
+ EK P +KN L E+ +GVHN+Y+ +++ +G
Sbjct: 139 VHEKFPQYLKNIK-GLSEETTTGVHNLYKMFKEGRLG 174
>X95636-1|CAA64892.1| 431|Drosophila melanogaster
S-adenosyl-L-homocysteine hydrolaseprotein.
Length = 431
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 212 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVG 322
+ EK P +KN L E+ +GVHN+Y+ +++ +G
Sbjct: 139 VHEKFPQFLKNIK-GLSEETTTGVHNLYKMFKEGRLG 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,109,406
Number of Sequences: 53049
Number of extensions: 329896
Number of successful extensions: 1000
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -