Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H04
(374 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 207 4e-53
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 205 2e-52
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 199 2e-50
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 178 2e-44
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 162 2e-39
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 161 5e-39
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 148 4e-35
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 137 7e-32
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 137 7e-32
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 122 2e-27
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 119 2e-26
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 116 1e-25
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 106 1e-22
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 100 2e-20
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 79 2e-14
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 77 1e-13
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 65 5e-10
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 64 8e-10
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 63 2e-09
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 60 2e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 59 3e-08
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 58 4e-08
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 57 1e-07
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 54 1e-06
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 53 1e-06
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 1e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 50 1e-05
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 50 1e-05
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 50 1e-05
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 48 4e-05
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 47 1e-04
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 47 1e-04
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 44 7e-04
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 44 7e-04
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 44 0.001
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 42 0.005
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.015
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 36 0.18
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 35 0.42
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 33 2.3
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 2.3
UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep: ... 32 3.9
UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 3.9
UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;... 31 5.2
UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4; P... 31 5.2
UniRef50_A3ZUT1 Cluster: Probable S-layer related protein; n=2; ... 31 5.2
UniRef50_A7TEH8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.2
UniRef50_A1VF88 Cluster: NLP/P60 protein precursor; n=2; Desulfo... 31 6.9
UniRef50_Q7QWB9 Cluster: GLP_177_6359_3891; n=1; Giardia lamblia... 31 6.9
UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely ort... 31 9.1
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 207 bits (506), Expect = 4e-53
Identities = 92/114 (80%), Positives = 104/114 (91%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGC+VD NLS LAL++V
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVV 114
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 205 bits (501), Expect = 2e-52
Identities = 94/114 (82%), Positives = 103/114 (90%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGC+VDANLSVL LVIV
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIV 114
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 199 bits (485), Expect = 2e-50
Identities = 87/114 (76%), Positives = 99/114 (86%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGC+VD+ LSVL+LVIV
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIV 114
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 178 bits (434), Expect = 2e-44
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 113
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 162 bits (394), Expect = 2e-39
Identities = 72/114 (63%), Positives = 90/114 (78%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MK N+SYP TG QK E+ D+ K IF++KRMG V+AD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGC+V ++ VLAL +V
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVV 114
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 161 bits (390), Expect = 5e-39
Identities = 72/114 (63%), Positives = 88/114 (77%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MK N+SYP TG QK E+ D+ K IF +K+MG EV+ D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGC+V ++ VLAL IV
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIV 114
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 148 bits (358), Expect = 4e-35
Identities = 70/117 (59%), Positives = 84/117 (71%)
Frame = +2
Query: 23 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 202
I MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGND
Sbjct: 39 IQKMKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGND 98
Query: 203 KQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
KQGFPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGC+V +LS L L +V
Sbjct: 99 KQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLV 155
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 137 bits (331), Expect = 7e-32
Identities = 62/113 (54%), Positives = 84/113 (74%)
Frame = +2
Query: 35 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 214
K+NV+YPATG K F+ +E R F +KR+G EVDA LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 215 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
PM GV TN+RVRLL+ + CY+P R+GER+RK+VRG +V ++SVL ++V
Sbjct: 61 PMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVV 113
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 137 bits (331), Expect = 7e-32
Identities = 57/114 (50%), Positives = 83/114 (72%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
M++ ++YP G Q + ++ D L YEKR+G +++ + LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRGC++ +S L V++
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVL 114
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 122 bits (295), Expect = 2e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLM 262
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 119 bits (287), Expect = 2e-26
Identities = 55/113 (48%), Positives = 74/113 (65%)
Frame = +2
Query: 35 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 214
K+N+S P TG K + D K + + RM +E D LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 215 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
PM QGVL + R RLL+ +G CY RR+GERKRKS+RGC+V +L L++V+V
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLV 120
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 116 bits (279), Expect = 1e-25
Identities = 53/116 (45%), Positives = 79/116 (68%), Gaps = 2/116 (1%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MK N++ P+TG Q E+ DE KLRI Y K++ +++D ++G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMK+G+L+ SRV++L+ KG + R + GER RKSVRGC+V +SVL + ++
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLL 116
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 106 bits (255), Expect = 1e-22
Identities = 52/116 (44%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQ 208
MKLN++YP G K FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 209 GFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCLVDANLSVLALVI 370
GFPM GVL +SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTI 116
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 99.5 bits (237), Expect = 2e-20
Identities = 46/100 (46%), Positives = 71/100 (71%)
Frame = +2
Query: 74 LFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 253
+FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 254 LLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
L+SKG + YR RR G R+RKSVRG +V + VL L+I+
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIIL 99
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.4 bits (187), Expect = 2e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 169
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 76.6 bits (180), Expect = 1e-13
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +2
Query: 182 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLA 361
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGC+V ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 362 LVIV 373
L +V
Sbjct: 116 LQVV 119
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 64.9 bits (151), Expect = 5e-10
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Frame = +2
Query: 23 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 178
+A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 1 MATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDV 59
Query: 179 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 328
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 60 KLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 64.1 bits (149), Expect = 8e-10
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Frame = +2
Query: 23 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 178
+A KL +S P G K E+ ++ +R+G E+ A ++ G+E
Sbjct: 1 MATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADA 59
Query: 179 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSV 355
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+
Sbjct: 60 KLKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQ 118
Query: 356 LALVIV 373
+ + IV
Sbjct: 119 VNMKIV 124
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 62.9 bits (146), Expect = 2e-09
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = +2
Query: 71 KLFEV-VDEHKLRIFYEKRMGAEVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 244
K F++ ++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 245 RVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
+ R L+S G + PR GER+RK+VRG + ++ + IV
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVRGNTISEDIVQINTKIV 234
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 59.7 bits (138), Expect = 2e-08
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +2
Query: 122 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 301
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 302 ERKRKSVRGCLVDANLS 352
R+RK+VRG + ++S
Sbjct: 87 LRRRKTVRGNTIADDIS 103
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 58.8 bits (136), Expect = 3e-08
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 44 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 217
+S P TG QK+ E + ++L K++G + ++ D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFP 62
Query: 218 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
M+ + +R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V
Sbjct: 63 MRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVV 113
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 58.4 bits (135), Expect = 4e-08
Identities = 38/116 (32%), Positives = 63/116 (54%)
Frame = +2
Query: 23 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 202
+A ++ V+ P +G FEV D F + +GA VD +G + GY + + GG+D
Sbjct: 1 MATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSD 57
Query: 203 KQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVI 370
G PM++ V + + +L+ +G + + P DGERKR +VRG V ++ L + I
Sbjct: 58 DAGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAI 112
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 56.8 bits (131), Expect = 1e-07
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MK+N++ P G Q + DE I K +G ++ +LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCLVDANLSVLALV 367
F +K+ + T R+++ + KG R +R K+++VRG ++ + +S + LV
Sbjct: 60 FLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSINLV 113
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 53.6 bits (123), Expect = 1e-06
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 122 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 301
++G D L+G GY L + GG+D GFPM + + R+L+S G + PR G
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKG 188
Query: 302 ERKRKSVRGCLVDANLSVLALVIV 373
ER+RK+VRG + ++ + VIV
Sbjct: 189 ERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 53.2 bits (122), Expect = 1e-06
Identities = 25/85 (29%), Positives = 52/85 (61%)
Frame = +2
Query: 119 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 298
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 299 GERKRKSVRGCLVDANLSVLALVIV 373
G R+RKS+RG + +++++ +V
Sbjct: 85 GLRRRKSLRGNTISKDITLINTKVV 109
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 50.4 bits (115), Expect = 1e-05
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +2
Query: 119 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 298
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 299 GERKRKSVR 325
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 50.4 bits (115), Expect = 1e-05
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 86 VDEHKLRIFYEKRMGAEVDAD-LLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 262
VD++K ++G +A+ L+G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 263 SKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
S G + P +GER+RK++RG + + + +IV
Sbjct: 178 S-GPPGFYPNENGERRRKTIRGNTISQEIVQINTIIV 213
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 50.4 bits (115), Expect = 1e-05
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 35 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEW---KGYVLRVAGGNDK 205
KL +S P +G + FE+ D R F ++G E+D +L D KG +R+ GG+
Sbjct: 5 KLVLSDPMSGKARQFEIKDPLAQR-FIGLKIGDELDGVILKDLIELPKGAKIRITGGSGI 63
Query: 206 QGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
+G PM GV + + +++ G Y P + G +K+K VRG + ++ + VIV
Sbjct: 64 EGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRGNTISDSIVQINAVIV 118
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 304
+G D L+G G ++ GG D G PM GV + R ++L++ G + PR GE
Sbjct: 142 IGDVFDGGLIG--MPGLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGE 198
Query: 305 RKRKSVRGCLV 337
R+RKSVRG ++
Sbjct: 199 RRRKSVRGRMI 209
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 48.4 bits (110), Expect = 4e-05
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 35 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 214
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 215 PMKQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
MKQ VL + RV LL++ HS Y+P R E S++ V +S+L +VI+
Sbjct: 51 SMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVII 103
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 47.2 bits (107), Expect = 1e-04
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 373 DDDQG*D*KVSINKATTNRLAFPLTVTTWSVARVA--F*HQETYTAVSQDSLFHREALLV 200
D+DQ V + ATT RLA T+ + A A H++ +T V Q +L H EALLV
Sbjct: 138 DNDQVQHGNVLGDDATTARLASAFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLV 197
Query: 199 VTAGNTENITFPFV 158
VT + E+++ PF+
Sbjct: 198 VTTHDLEDVSLPFL 211
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 46.8 bits (106), Expect = 1e-04
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 304
+G+E DA LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 305 RKRKSVRG 328
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 44.4 bits (100), Expect = 7e-04
Identities = 30/109 (27%), Positives = 59/109 (54%)
Frame = +2
Query: 44 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMK 223
++ P TG E+ E ++ +++G EVD + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMR 64
Query: 224 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVI 370
+ T + ++L+ K S YR ++G RKR + RG ++ ++++ + L I
Sbjct: 65 PDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDITQINLKI 111
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 44.4 bits (100), Expect = 7e-04
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 119 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 298
K +G VD + G GY +++ GG D GF MK + R R+L + G Y P+
Sbjct: 32 KSIGDVVDGSIFG--LAGYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLP 88
Query: 299 GERKRKSVRG 328
G+R+RK +RG
Sbjct: 89 GQRRRKMMRG 98
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 304
+G E DA ++G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 305 RKRKSVRGCLVDANL 349
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 41.5 bits (93), Expect = 0.005
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 245 RVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 60
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.9 bits (89), Expect = 0.015
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 26 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDK 205
+V+K+ VS P +G E + L Y K++G +D +G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 206 QGFPMKQGV 232
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 36.3 bits (80), Expect = 0.18
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 194 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSDIPL 57
R++ GE ++ + LEDLH+L + RR+G P L + PL
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVLVFDCNAPL 199
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 35.1 bits (77), Expect = 0.42
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLL 154
M + ++YPA+ QKL ++ +H++ Y+ E+ ADLL
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 32.7 bits (71), Expect = 2.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +2
Query: 215 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCL 334
P K+ ++T++R ++L+ +SCY PR G+ + ++ L
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLL 444
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 32.7 bits (71), Expect = 2.3
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 35 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
KL+ SY A L EV D+ K RI+YE A + GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 212 FPMKQGVL 235
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep:
Alr3925 protein - Anabaena sp. (strain PCC 7120)
Length = 987
Score = 31.9 bits (69), Expect = 3.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 197 YRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSD 66
Y G+H+L+ E+ HQ+Q+ Y H+RYG P L++ D
Sbjct: 758 YEHLSGKHSLTD---EERHQIQK-YNLHQRYGILVTPSLKLRDD 797
>UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 860
Score = 31.9 bits (69), Expect = 3.9
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 71 KLFEVVDEHKLRIFYEKRMGAEVDADLLGDE-WKGY 175
KL E ++HK IF +R+ E + LLGDE WK Y
Sbjct: 747 KLIEDDNQHKYTIFLSRRIEDEKNNVLLGDEIWKEY 782
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 31.9 bits (69), Expect = 3.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 83 VVDEHKLRIFYEKRMGAEVDADLLGDEW 166
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
>UniRef50_UPI0001552B57 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 215
Score = 31.5 bits (68), Expect = 5.2
Identities = 20/60 (33%), Positives = 24/60 (40%)
Frame = +2
Query: 128 GAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGER 307
GAE+ GDE G LR G +QG+ R R + HS R R G R
Sbjct: 44 GAEIPPAGAGDEPGGSTLRPCAGTRRQGYVTNARAPPRPRRRCFRAVRHSISRETRPGAR 103
>UniRef50_Q60BZ5 Cluster: Selenium-binding family protein; n=4;
Proteobacteria|Rep: Selenium-binding family protein -
Methylococcus capsulatus
Length = 459
Score = 31.5 bits (68), Expect = 5.2
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +2
Query: 62 GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKG----YVLRVAGGNDKQG 211
G +LF++ D H R YEK +GA+V +++ W G Y + DK+G
Sbjct: 348 GKTRLFDISDPHHPRQVYEKTIGAQV--NMVSSSWDGQRLYYTSSLLANWDKKG 399
>UniRef50_A3ZUT1 Cluster: Probable S-layer related protein; n=2;
Planctomycetaceae|Rep: Probable S-layer related protein
- Blastopirellula marina DSM 3645
Length = 749
Score = 31.5 bits (68), Expect = 5.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 14 KGLIAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGD 160
K L+ V+ + +Y + + +VDE +Y +RM AEV D + D
Sbjct: 547 KALVRVITQSKAYQLSALPNEYNLVDEQNYSRYYPRRMQAEVMLDAVND 595
>UniRef50_A7TEH8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 541
Score = 31.5 bits (68), Expect = 5.2
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 65 CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 244
C+ L+E E I R+ + + L G W G + + G +QG +K+ ++ N
Sbjct: 451 CELLYECSCEEIEEICTIARLNGSIGSRLTGAGWGGSTIHMVPGGIEQGERVKEALINNY 510
Query: 245 RVR 253
+R
Sbjct: 511 YIR 513
>UniRef50_A1VF88 Cluster: NLP/P60 protein precursor; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: NLP/P60
protein precursor - Desulfovibrio vulgaris subsp.
vulgaris (strain DP4)
Length = 464
Score = 31.1 bits (67), Expect = 6.9
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -3
Query: 309 FLSPSRRGL*QEWPFDIKRRTRLLVRTPCFIG 214
F +P+R G Q +PFD+ +RT + + TP F+G
Sbjct: 166 FTAPTRAG--QGYPFDMFQRTAVWMGTPVFVG 195
>UniRef50_Q7QWB9 Cluster: GLP_177_6359_3891; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_177_6359_3891 - Giardia lamblia ATCC
50803
Length = 822
Score = 31.1 bits (67), Expect = 6.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 194 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPP-LQITSDIPLPGMKRSTS*LRSV 18
R +H H LS E + +L R A+ A AHPP Q+ + P+ + +S S L +
Sbjct: 307 RIRHSLHGLSFLLFESISELDRGLAYFSDQFAVAHPPKTQLATQAPV--VSQSPSYLINF 364
Query: 17 PSNP 6
NP
Sbjct: 365 FDNP 368
>UniRef50_UPI00015564F7 Cluster: PREDICTED: similar to likely
ortholog of H. sapiens myosin XVB (MYO15B); n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
likely ortholog of H. sapiens myosin XVB (MYO15B) -
Ornithorhynchus anatinus
Length = 1593
Score = 30.7 bits (66), Expect = 9.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 110 FYEKRMGAEVDADLLGDEWKGYVLRVAG 193
F E+R AEV++ G++W G+VL+ G
Sbjct: 876 FTEERYSAEVESWTTGEQWAGWVLQTRG 903
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,741,717
Number of Sequences: 1657284
Number of extensions: 6904999
Number of successful extensions: 16196
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 15915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16175
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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