Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H04
(374 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 219 7e-58
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 219 7e-58
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 219 7e-58
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 219 7e-58
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 219 7e-58
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 215 1e-56
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 178 2e-45
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 178 2e-45
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 154 4e-38
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 154 4e-38
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 44 8e-05
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 44 8e-05
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 42 3e-04
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 42 3e-04
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 0.84
AY122101-1|AAM52613.1| 1046|Drosophila melanogaster GH08821p pro... 28 4.5
AE013599-4022|AAX52689.1| 1046|Drosophila melanogaster CG16778-P... 28 4.5
AE013599-4021|AAM68329.1| 1046|Drosophila melanogaster CG16778-P... 28 4.5
AE013599-4020|AAF47317.2| 1046|Drosophila melanogaster CG16778-P... 28 4.5
AE013599-4019|AAG22201.2| 1046|Drosophila melanogaster CG16778-P... 28 4.5
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 219 bits (536), Expect = 7e-58
Identities = 98/114 (85%), Positives = 108/114 (94%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 219 bits (536), Expect = 7e-58
Identities = 98/114 (85%), Positives = 108/114 (94%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 219 bits (536), Expect = 7e-58
Identities = 98/114 (85%), Positives = 108/114 (94%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 219 bits (536), Expect = 7e-58
Identities = 98/114 (85%), Positives = 108/114 (94%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 219 bits (536), Expect = 7e-58
Identities = 98/114 (85%), Positives = 108/114 (94%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 114
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 215 bits (526), Expect = 1e-56
Identities = 96/112 (85%), Positives = 106/112 (94%)
Frame = +2
Query: 38 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 217
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 218 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGC+VDAN+SVLALV++
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVL 117
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 178 bits (434), Expect = 2e-45
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 113
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 178 bits (434), Expect = 2e-45
Identities = 84/114 (73%), Positives = 97/114 (85%)
Frame = +2
Query: 32 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 211
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 212 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 113
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 154 bits (373), Expect = 4e-38
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 304
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 305 RKRKSVRGCLVDANLSVLALVIV 373
RKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVL 83
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 154 bits (373), Expect = 4e-38
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 125 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 304
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 305 RKRKSVRGCLVDANLSVLALVIV 373
RKRKSVRGC+VDAN+SVLALV++
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVL 83
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 239 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 48
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 43.6 bits (98), Expect = 8e-05
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +2
Query: 239 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 48
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 245 RVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 62
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +2
Query: 245 RVRLLMSKGHSCYRPRRDGERKRKSVRGCLVDANLSVLALVIV 373
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV++
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVL 60
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 0.84
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 209 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 78
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>AY122101-1|AAM52613.1| 1046|Drosophila melanogaster GH08821p
protein.
Length = 1046
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPFDIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E P + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4022|AAX52689.1| 1046|Drosophila melanogaster CG16778-PD,
isoform D protein.
Length = 1046
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPFDIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E P + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4021|AAM68329.1| 1046|Drosophila melanogaster CG16778-PC,
isoform C protein.
Length = 1046
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPFDIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E P + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4020|AAF47317.2| 1046|Drosophila melanogaster CG16778-PB,
isoform B protein.
Length = 1046
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPFDIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E P + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
>AE013599-4019|AAG22201.2| 1046|Drosophila melanogaster CG16778-PA,
isoform A protein.
Length = 1046
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 339 STRQPRTDLRF-LSPSRRGL*QEWPFDIKRRTRLLVRTPCFIGKPCLSLPPATRRT*P 169
ST+ TD +P ++ L E P + + +LL +TP P S PP T T P
Sbjct: 15 STKLSMTDFACQAAPVKQPLPLELPLPLSVQLQLLAKTPTSDHAPMHSTPPTTPPTPP 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,563
Number of Sequences: 53049
Number of extensions: 340503
Number of successful extensions: 796
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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