Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H03
(246 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.60
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 26 0.80
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 24 2.4
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 24 2.4
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 24 3.2
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 23 4.3
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 23 4.3
SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr 2|||Ma... 23 4.3
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 23 4.3
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 23 4.3
SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein S15a... 23 5.6
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 23 5.6
SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein S... 23 5.6
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 23 5.6
SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces po... 23 5.6
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 23 7.4
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 23 7.4
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 23 7.4
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 23 7.4
SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 22 9.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 22 9.8
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 22 9.8
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 22 9.8
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 0.60
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 147 IQYSWFHLGLYCSTVFTIC 203
I Y WF L C FT+C
Sbjct: 794 ISYDWFDFFLRCGVDFTVC 812
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 25.8 bits (54), Expect = 0.80
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 64 DFFSSIPTHIDYVGQAKAEKL 126
D +S +P++++Y AKAEKL
Sbjct: 843 DTWSRLPSNLEYCSWAKAEKL 863
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 24.2 bits (50), Expect = 2.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 18 CCGFCNSAFSLLND 59
CC FC+S F+ L D
Sbjct: 59 CCLFCDSTFTCLKD 72
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 120 KIIQSDNHIIQYSWFHL 170
K QSD H + Y W HL
Sbjct: 365 KYAQSDTHYLLYIWDHL 381
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 23.8 bits (49), Expect = 3.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 3 TRKICCCGFCNSAFS 47
T CCC CNS S
Sbjct: 1099 TNVACCCSKCNSTMS 1113
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 23.4 bits (48), Expect = 4.3
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 129 QSDNHIIQYSWF 164
Q DN+I+ YSW+
Sbjct: 74 QVDNYILSYSWY 85
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 23.4 bits (48), Expect = 4.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 121 FQPLLVQHSQYV*VWMK 71
F+ +L++H Y+ +WMK
Sbjct: 259 FEEVLIEHPGYLNLWMK 275
>SPBC1105.08 |||EMP70 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 629
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 100 VGQAKAEKLYRAIITLFSIVGFIWGYI 180
V ++ L A + LF I GF+ GY+
Sbjct: 357 VAPSRRGSLATATVALFIISGFVSGYV 383
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 23.4 bits (48), Expect = 4.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 135 DNHIIQYSWFHLGLYCSTVFTICIYPWS 218
D+ + + F LG C TV +C+ P S
Sbjct: 344 DSKLTRLLKFSLGGNCRTVMIVCVSPSS 371
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 23.4 bits (48), Expect = 4.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDNG 65
+CC G + +SL NDNG
Sbjct: 606 VCCVGGDVNMYSLGNDNG 623
>SPAC5D6.01 |rps2202|rps22-2, rps15a-2|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 111 CLSNIVNMCRYG*KKIHYRLAKKML 37
CL+NIVN R G +++ R + K++
Sbjct: 10 CLNNIVNAERRGRRQVLIRPSSKVI 34
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 23.0 bits (47), Expect = 5.6
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 171 GLYCSTVFTICIYPWSWMST 230
G Y +++ IC+ PW+ +S+
Sbjct: 382 GGYIASIIGICMCPWNLLSS 401
>SPAC22A12.04c |rps2201|rps22-1, rps15a-1|40S ribosomal protein
S15a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 111 CLSNIVNMCRYG*KKIHYRLAKKML 37
CL+NIVN R G +++ R + K++
Sbjct: 10 CLNNIVNAERRGRRQVLIRPSSKVI 34
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 23.0 bits (47), Expect = 5.6
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +3
Query: 171 GLYCSTVFTICIYPWSWMST 230
G Y +++ +C+ PW+ +S+
Sbjct: 384 GGYIASIIALCMCPWNLLSS 403
>SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 30 CNSAFSLLNDNGFFFIH 80
CN +F + +DN FF H
Sbjct: 287 CNGSFKVWSDNTFFAQH 303
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 151 SIVGFIWGYIVQQFSQSVYIL 213
S+VGFIW + FS+ IL
Sbjct: 19 SLVGFIWSPLKNTFSKRNSIL 39
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 67 FFSSIPTHIDYVGQAKAEKL 126
+FSS H+ Y+ Q+ EKL
Sbjct: 55 YFSSQSHHVTYLHQSPLEKL 74
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 22.6 bits (46), Expect = 7.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 162 FHLGLYCSTVFTICIYPWSWMSTC 233
++ G C V + CIY W S C
Sbjct: 37 YYDGPTCCVVGSSCIYSNPWYSQC 60
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 121 KLYRAIITLFSIVGFIWGYIVQQ 189
K Y I + S VG++WG +++
Sbjct: 121 KQYAEIASKISAVGYLWGSNIKE 143
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 22.6 bits (46), Expect = 7.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 55 TIMDFFSSIPTHIDYVGQAKAEKLYRAIITLFSI 156
+++ S+P I+ V KA +L R +IT S+
Sbjct: 262 SLVSLIESLPFLINVVALDKAAELTRQVITRCSV 295
>SPBC1539.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 22.2 bits (45), Expect = 9.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 153 YSWFHLGLYCSTVFTICIYP 212
Y+ FH+ Y +V IYP
Sbjct: 123 YATFHISTYLRSVLLPAIYP 142
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 22.2 bits (45), Expect = 9.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 67 FFSSIPTHIDYVGQAKAEKLYRAIITLFSIVGFIWGYIV 183
F SS+ + + A +LY +++ S+V F WGY +
Sbjct: 4074 FMSSMMSTVSLPSVRLACQLYG--VSIQSLVFFTWGYYI 4110
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 64 PLSFSKENAELQKPQQQ 14
P+S KE+AE QKP ++
Sbjct: 434 PVSKPKESAEEQKPSKE 450
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 22.2 bits (45), Expect = 9.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 96 LCWTSKG*KIIQSDNHIIQYSWFHLGLYCSTVFTICIYPWS 218
LC + + D+ + + F LG C T +CI P S
Sbjct: 330 LCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSS 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,071,076
Number of Sequences: 5004
Number of extensions: 19710
Number of successful extensions: 57
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 43306998
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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