Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_H03
(246 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 23 2.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 22 2.8
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 22 2.8
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 21 4.9
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 21 4.9
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 21 4.9
AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding pr... 21 6.5
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 21 8.5
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 21 8.5
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 21 8.5
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 21 8.5
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 21 8.5
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 22.6 bits (46), Expect = 2.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 65 IFFHPYLHILTMLDKQRLKNYT 130
+FF YL I LDKQ + + T
Sbjct: 503 LFFKAYLAIAQSLDKQSIPHRT 524
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 22.2 bits (45), Expect = 2.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 84 RYG*KKIHYRLAKKMLSYKS 25
R+G K+HY A LS KS
Sbjct: 1259 RFGWFKVHYNHANNTLSTKS 1278
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 22.2 bits (45), Expect = 2.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 84 RYG*KKIHYRLAKKMLSYKS 25
R+G K+HY A LS KS
Sbjct: 1260 RFGWFKVHYNHANNTLSTKS 1279
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -3
Query: 238 QQQVDIQLQGYIQIVKTVEQYNP 170
+QQ++ L+GY+ + E +P
Sbjct: 402 KQQIEEDLRGYLDWITQAEDIDP 424
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 152 LNNVIIALYNFSAFACPT*SICVG 81
+N++ I L + ++ACP +CVG
Sbjct: 189 INSLAIVLAH--SYACPEHELCVG 210
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 21.4 bits (43), Expect = 4.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 152 LNNVIIALYNFSAFACPT*SICVG 81
+N++ I L + ++ACP +CVG
Sbjct: 189 INSLAIVLAH--SYACPEHELCVG 210
>AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding
protein AgamOBP18 protein.
Length = 151
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 130 CIIFQPLLVQHSQ 92
C++FQP LV Q
Sbjct: 19 CLVFQPALVNAQQ 31
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDN 62
IC CG C+ S DN
Sbjct: 1 ICTCGTCSCFDSWSGDN 17
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDN 62
IC CG C+ S DN
Sbjct: 1 ICTCGTCSCFDSWSGDN 17
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDN 62
IC CG C+ S DN
Sbjct: 1 ICTCGTCSCFDSWSGDN 17
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDN 62
IC CG C+ S DN
Sbjct: 1 ICTCGTCSCFDSWSGDN 17
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 12 ICCCGFCNSAFSLLNDN 62
IC CG C+ S DN
Sbjct: 577 ICTCGTCSCFDSWSGDN 593
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,633
Number of Sequences: 2352
Number of extensions: 5807
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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