Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_H01
         (199 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   0.46 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   1.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   3.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    19   5.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    19   5.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    19   5.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   7.5  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    18   9.9  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 0.46
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 94  SFIKMAKLCEIKSERSVIIEMLQAYKDFPCLLGCI 198
           +F ++ KL +    R  +I   + ++++ C L CI
Sbjct: 41  TFHELKKLRDSSEARIKLINEEENFRNYGCFLACI 75


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 161 KLIRIFHVYWDV 196
           K +R F+VYW+V
Sbjct: 38  KTVREFNVYWNV 49


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 77  QLRFSLNSHGELITKLKGEIR 15
           ++++ L  HG +I +L GEI+
Sbjct: 264 KVQYELAKHGIVIEELGGEIQ 284


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 58   FNEKRNWCDIRFSFIKMAKLCEIKSERSVII 150
            +NEKR W  +R++ I  A    I+S+ S ++
Sbjct: 1191 WNEKRFWERLRYA-IPSAGDISIESKSSPLV 1220


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 GKIM*N*IRTKCY 146
           GK+  N I TKCY
Sbjct: 112 GKMYFNLIDTKCY 124


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 GKIM*N*IRTKCY 146
           GK+  N I TKCY
Sbjct: 117 GKMYFNLIDTKCY 129


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 GKIM*N*IRTKCY 146
           GK+  N I TKCY
Sbjct: 117 GKMYFNLIDTKCY 129


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 130 SERSVIIEMLQAYKDFP 180
           S  S +  ML  Y DFP
Sbjct: 195 SADSAMCAMLTIYADFP 211


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/22 (27%), Positives = 10/22 (45%)
 Frame = +1

Query: 112 KLCEIKSERSVIIEMLQAYKDF 177
           K+C +      I E+    K+F
Sbjct: 133 KVCSVNDVNMTITELTDPVKEF 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,986
Number of Sequences: 438
Number of extensions: 687
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2668491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)