Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_G24
         (77 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    22   3.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   5.2  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    21   6.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 77  NNSNSAVVSRQQTPPP 30
           NN+N+ V + QQ P P
Sbjct: 74  NNNNNGVGNHQQQPSP 89


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 72  QQFSSCQQTANPTPSPPRAE 13
           Q F  C     P P+PP A+
Sbjct: 389 QAFVVCVPVQRPKPNPPWAD 408


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 77  NNSNSAVVSRQQTPPPPRLVPNS 9
           + S SA   +++ P PPR+  N+
Sbjct: 140 DTSASAPKKKKRKPKPPRIYNNN 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,112
Number of Sequences: 2352
Number of extensions: 861
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 7
effective length of database: 547,515
effective search space used:  9855270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)